Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0400 and DVU0401 are separated by 17 nucleotides DVU0401 and dsrA are separated by 471 nucleotides dsrA and dvsB are separated by 18 nucleotides
DVU0400: DVU0400 - hypothetical protein (TIGR), at 448,581 to 449,132
DVU0400
DVU0401: DVU0401 - hypothetical protein (TIGR), at 449,150 to 449,416
DVU0401
DVU0402: dsrA - dissimilatory sulfite reductase alpha subunit (TIGR), at 449,888 to 451,201
dsrA
DVU0403: dvsB - dissimilatory sulfite reductase beta subunit (TIGR), at 451,220 to 452,365
dvsB
Position (kb) 449
450
451
452 Strain fitness (log2 ratio) -2
-1
0
1 at 448.906 kb on - strand, within DVU0400 at 449.013 kb on + strand, within DVU0400 at 449.027 kb on - strand, within DVU0400 at 449.139 kb on + strand at 449.166 kb on + strand at 449.174 kb on - strand at 449.174 kb on - strand at 449.198 kb on - strand, within DVU0401 at 449.212 kb on + strand, within DVU0401 at 449.324 kb on + strand, within DVU0401 at 449.361 kb on - strand, within DVU0401 at 449.385 kb on + strand, within DVU0401 at 449.393 kb on - strand at 449.465 kb on - strand at 449.484 kb on + strand at 449.494 kb on + strand at 449.513 kb on + strand at 449.513 kb on + strand at 449.513 kb on + strand at 449.519 kb on - strand at 449.526 kb on - strand at 449.561 kb on + strand at 449.654 kb on - strand at 449.685 kb on - strand at 449.770 kb on - strand at 449.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 448,906 - DVU0400 0.59 -1.5 449,013 + DVU0400 0.78 +0.4 449,027 - DVU0400 0.81 -0.4 449,139 + +0.1 449,166 + -0.9 449,174 - -0.1 449,174 - -1.4 449,198 - DVU0401 0.18 +0.7 449,212 + DVU0401 0.23 -2.3 449,324 + DVU0401 0.65 +0.3 449,361 - DVU0401 0.79 -1.2 449,385 + DVU0401 0.88 +0.3 449,393 - +1.7 449,465 - +1.3 449,484 + +0.0 449,494 + +0.1 449,513 + -1.3 449,513 + +1.4 449,513 + +0.1 449,519 - +0.7 449,526 - -0.5 449,561 + -0.4 449,654 - +0.7 449,685 - +0.1 449,770 - +0.3 449,864 - +1.1
Or see this region's nucleotide sequence