Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3104

Experiment: MoYLS4 with Uranyl Acetate 1mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU3103 and pal are separated by 199 nucleotides DVU3103: DVU3103 - tolB protein, putative (TIGR), at 3,242,725 to 3,244,095 DVU3103 DVU3104: pal - peptidoglycan-associated lipoprotein, putative (TIGR), at 3,244,295 to 3,244,798 pal Position (kb) 3244 3245Strain fitness (log2 ratio) -2 -1 0 1 2at 3244.104 kb on - strandat 3244.194 kb on - strandat 3244.196 kb on - strandat 3244.937 kb on + strandat 3244.945 kb on - strandat 3245.054 kb on + strandat 3245.062 kb on - strandat 3245.122 kb on + strandat 3245.130 kb on - strandat 3245.263 kb on - strandat 3245.389 kb on + strandat 3245.503 kb on + strandat 3245.621 kb on - strandat 3245.777 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM
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3,244,104 - +1.9
3,244,194 - -0.1
3,244,196 - +0.6
3,244,937 + +0.4
3,244,945 - +0.7
3,245,054 + +2.4
3,245,062 - -0.9
3,245,122 + +0.4
3,245,130 - -0.1
3,245,263 - +0.0
3,245,389 + +1.9
3,245,503 + -1.8
3,245,621 - -0.3
3,245,777 - +0.1

Or see this region's nucleotide sequence