Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2939 and DVU2940 are separated by 286 nucleotides DVU2940 and DVU2941 are separated by 131 nucleotides DVU2941 and purB are separated by 99 nucleotides
DVU2939: DVU2939 - conserved hypothetical protein (TIGR), at 3,044,106 to 3,044,993
DVU2939
DVU2940: DVU2940 - hypothetical protein (TIGR), at 3,045,280 to 3,045,390
DVU2940
DVU2941: DVU2941 - conserved hypothetical protein (TIGR), at 3,045,522 to 3,045,821
DVU2941
DVU2942: purB - adenylosuccinate lyase (TIGR), at 3,045,921 to 3,047,213
purB
Position (kb)
3045
3046 Strain fitness (log2 ratio)
-1
0
1
2 at 3044.565 kb on + strand, within DVU2939 at 3044.565 kb on + strand, within DVU2939 at 3044.565 kb on + strand, within DVU2939 at 3044.573 kb on - strand, within DVU2939 at 3044.586 kb on - strand, within DVU2939 at 3044.645 kb on + strand, within DVU2939 at 3044.653 kb on - strand, within DVU2939 at 3044.721 kb on - strand, within DVU2939 at 3044.721 kb on - strand, within DVU2939 at 3044.736 kb on - strand, within DVU2939 at 3044.736 kb on - strand, within DVU2939 at 3044.880 kb on + strand, within DVU2939 at 3044.883 kb on - strand, within DVU2939 at 3044.890 kb on - strand, within DVU2939 at 3045.026 kb on + strand at 3045.046 kb on - strand at 3045.100 kb on + strand at 3045.191 kb on + strand at 3045.199 kb on - strand at 3045.214 kb on + strand at 3045.826 kb on + strand at 3045.826 kb on + strand at 3045.826 kb on + strand at 3045.826 kb on + strand at 3045.826 kb on + strand at 3045.826 kb on + strand at 3045.845 kb on - strand at 3045.845 kb on - strand at 3045.887 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 3,044,565 + DVU2939 0.52 -0.2 3,044,565 + DVU2939 0.52 -0.2 3,044,565 + DVU2939 0.52 +0.3 3,044,573 - DVU2939 0.53 +0.1 3,044,586 - DVU2939 0.54 -0.2 3,044,645 + DVU2939 0.61 +0.8 3,044,653 - DVU2939 0.62 -0.5 3,044,721 - DVU2939 0.69 -0.4 3,044,721 - DVU2939 0.69 +1.3 3,044,736 - DVU2939 0.71 +0.0 3,044,736 - DVU2939 0.71 -0.2 3,044,880 + DVU2939 0.87 -0.5 3,044,883 - DVU2939 0.88 -0.3 3,044,890 - DVU2939 0.88 -0.5 3,045,026 + +1.7 3,045,046 - -0.3 3,045,100 + +0.5 3,045,191 + +0.6 3,045,199 - -0.4 3,045,214 + -0.4 3,045,826 + +0.7 3,045,826 + +1.7 3,045,826 + +0.4 3,045,826 + -0.3 3,045,826 + -0.5 3,045,826 + +0.3 3,045,845 - -0.4 3,045,845 - -0.1 3,045,887 + +2.3
Or see this region's nucleotide sequence