Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2758

Experiment: MoYLS4 with Uranyl Acetate 1mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2757 and DVU2758 are separated by 61 nucleotidesDVU2758 and DVU2760 are separated by 372 nucleotides DVU2757: DVU2757 - radical SAM domain protein (TIGR), at 2,865,968 to 2,867,095 DVU2757 DVU2758: DVU2758 - conserved hypothetical protein (TIGR), at 2,867,157 to 2,867,999 DVU2758 DVU2760: DVU2760 - hypothetical protein (TIGR), at 2,868,372 to 2,868,983 DVU2760 Position (kb) 2867 2868Strain fitness (log2 ratio) -2 -1 0 1at 2867.064 kb on + strandat 2867.064 kb on - strandat 2867.066 kb on + strandat 2867.098 kb on - strandat 2867.139 kb on - strandat 2867.165 kb on + strandat 2867.174 kb on - strandat 2867.179 kb on - strandat 2867.354 kb on + strand, within DVU2758at 2867.987 kb on - strandat 2868.028 kb on + strandat 2868.141 kb on + strandat 2868.165 kb on + strandat 2868.170 kb on + strandat 2868.182 kb on + strandat 2868.188 kb on + strandat 2868.189 kb on + strandat 2868.232 kb on - strandat 2868.343 kb on + strandat 2868.358 kb on - strandat 2868.360 kb on + strandat 2868.364 kb on + strandat 2868.539 kb on + strand, within DVU2760at 2868.577 kb on + strand, within DVU2760at 2868.577 kb on + strand, within DVU2760at 2868.669 kb on - strand, within DVU2760at 2868.679 kb on - strand, within DVU2760at 2868.835 kb on - strand, within DVU2760at 2868.923 kb on + strandat 2868.946 kb on - strandat 2868.968 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM
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2,867,064 + +0.0
2,867,064 - -0.2
2,867,066 + -0.3
2,867,098 - -2.1
2,867,139 - -0.1
2,867,165 + +0.4
2,867,174 - -0.6
2,867,179 - +0.1
2,867,354 + DVU2758 0.23 +1.1
2,867,987 - -0.3
2,868,028 + -0.4
2,868,141 + -0.6
2,868,165 + +0.7
2,868,170 + -0.1
2,868,182 + -0.0
2,868,188 + +1.7
2,868,189 + +0.2
2,868,232 - -0.5
2,868,343 + +1.1
2,868,358 - +0.1
2,868,360 + -0.4
2,868,364 + -0.1
2,868,539 + DVU2760 0.27 +0.1
2,868,577 + DVU2760 0.33 -0.0
2,868,577 + DVU2760 0.33 -0.1
2,868,669 - DVU2760 0.49 -1.9
2,868,679 - DVU2760 0.50 -0.1
2,868,835 - DVU2760 0.76 +0.0
2,868,923 + +0.7
2,868,946 - -0.1
2,868,968 + -0.4

Or see this region's nucleotide sequence