Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2502

Experiment: MoYLS4 with Uranyl Acetate 1mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsA and DVU2501 are separated by 30 nucleotidesDVU2501 and murB overlap by 10 nucleotidesmurB and murC are separated by 1 nucleotides DVU2500: ftsA - cell division protein FtsA (TIGR), at 2,611,296 to 2,612,522 ftsA DVU2501: DVU2501 - cell division protein FtsQ, putative (TIGR), at 2,612,553 to 2,613,389 DVU2501 DVU2502: murB - UDP-N-acetylenolpyruvoylglucosamine reductase (TIGR), at 2,613,380 to 2,614,270 murB DVU2503: murC - UDP-N-acetylmuramate--alanine ligase (TIGR), at 2,614,272 to 2,615,636 murC Position (kb) 2613 2614 2615Strain fitness (log2 ratio) -1 0 1at 2612.548 kb on - strandat 2612.578 kb on + strandat 2613.307 kb on + strandat 2614.293 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM
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2,612,548 - -0.9
2,612,578 + -0.5
2,613,307 + +0.7
2,614,293 - -1.2

Or see this region's nucleotide sequence