Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pflA and DVU1405 overlap by 17 nucleotides DVU1405 and purM are separated by 10 nucleotides purM and DVU1407 are separated by 316 nucleotides
DVU1404: pflA - radical SAM domain protein (TIGR), at 1,473,006 to 1,474,112
pflA
DVU1405: DVU1405 - hypothetical protein (TIGR), at 1,474,096 to 1,474,599
DVU1405
DVU1406: purM - phosphoribosylformylglycinamidine cyclo-ligase (TIGR), at 1,474,610 to 1,475,662
purM
DVU1407: DVU1407 - radical SAM domain protein (TIGR), at 1,475,979 to 1,477,454
DVU1407
Position (kb)
1474
1475
1476 Strain fitness (log2 ratio)
-1
0
1
2 at 1473.610 kb on - strand, within pflA at 1473.645 kb on + strand, within pflA at 1473.668 kb on + strand, within pflA at 1473.677 kb on - strand, within pflA at 1473.766 kb on - strand, within pflA at 1473.805 kb on + strand, within pflA at 1473.813 kb on - strand, within pflA at 1473.813 kb on - strand, within pflA at 1473.813 kb on - strand, within pflA at 1473.870 kb on + strand, within pflA at 1473.870 kb on + strand, within pflA at 1473.878 kb on - strand, within pflA at 1473.941 kb on - strand, within pflA at 1473.955 kb on + strand, within pflA at 1473.963 kb on - strand, within pflA at 1474.044 kb on + strand at 1474.079 kb on + strand at 1474.097 kb on - strand at 1474.196 kb on - strand, within DVU1405 at 1474.203 kb on - strand, within DVU1405 at 1474.203 kb on - strand, within DVU1405 at 1474.203 kb on - strand, within DVU1405 at 1474.320 kb on + strand, within DVU1405 at 1474.342 kb on + strand, within DVU1405 at 1474.347 kb on + strand, within DVU1405 at 1474.423 kb on + strand, within DVU1405 at 1474.423 kb on + strand, within DVU1405 at 1474.480 kb on - strand, within DVU1405 at 1474.534 kb on + strand, within DVU1405 at 1475.656 kb on + strand at 1475.740 kb on + strand at 1475.781 kb on - strand at 1475.803 kb on + strand at 1475.861 kb on + strand at 1475.897 kb on - strand at 1475.990 kb on - strand at 1476.081 kb on + strand at 1476.101 kb on + strand at 1476.176 kb on + strand, within DVU1407 at 1476.275 kb on + strand, within DVU1407 at 1476.275 kb on + strand, within DVU1407 at 1476.299 kb on + strand, within DVU1407 at 1476.299 kb on + strand, within DVU1407
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 1,473,610 - pflA DVU1404 0.55 -0.3 1,473,645 + pflA DVU1404 0.58 -0.1 1,473,668 + pflA DVU1404 0.60 +0.8 1,473,677 - pflA DVU1404 0.61 +0.4 1,473,766 - pflA DVU1404 0.69 -0.9 1,473,805 + pflA DVU1404 0.72 -1.0 1,473,813 - pflA DVU1404 0.73 +1.2 1,473,813 - pflA DVU1404 0.73 +0.2 1,473,813 - pflA DVU1404 0.73 -1.2 1,473,870 + pflA DVU1404 0.78 +0.9 1,473,870 + pflA DVU1404 0.78 +0.3 1,473,878 - pflA DVU1404 0.79 +1.7 1,473,941 - pflA DVU1404 0.84 +0.7 1,473,955 + pflA DVU1404 0.86 +0.4 1,473,963 - pflA DVU1404 0.86 -0.3 1,474,044 + +1.3 1,474,079 + +0.4 1,474,097 - +0.1 1,474,196 - DVU1405 0.20 +0.1 1,474,203 - DVU1405 0.21 -0.5 1,474,203 - DVU1405 0.21 +0.7 1,474,203 - DVU1405 0.21 -0.1 1,474,320 + DVU1405 0.44 -0.0 1,474,342 + DVU1405 0.49 -0.0 1,474,347 + DVU1405 0.50 -0.6 1,474,423 + DVU1405 0.65 -0.0 1,474,423 + DVU1405 0.65 +0.2 1,474,480 - DVU1405 0.76 +0.2 1,474,534 + DVU1405 0.87 -0.1 1,475,656 + +2.0 1,475,740 + +0.1 1,475,781 - -0.3 1,475,803 + +0.2 1,475,861 + +0.3 1,475,897 - -0.6 1,475,990 - -0.1 1,476,081 + +0.3 1,476,101 + +0.1 1,476,176 + DVU1407 0.13 +0.6 1,476,275 + DVU1407 0.20 +1.4 1,476,275 + DVU1407 0.20 +0.3 1,476,299 + DVU1407 0.22 +0.6 1,476,299 + DVU1407 0.22 -1.5
Or see this region's nucleotide sequence