Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1324

Experiment: MoYLS4 with Uranyl Acetate 1mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntsecY and map are separated by 1 nucleotidesmap and rpmJ are separated by 93 nucleotidesrpmJ and rpsM are separated by 18 nucleotidesrpsM and rpsK are separated by 148 nucleotides DVU1323: secY - preprotein translocase, SecY subunit (TIGR), at 1,402,058 to 1,403,371 secY DVU1324: map - methionine aminopeptidase, type I (TIGR), at 1,403,373 to 1,404,152 map DVU1325: rpmJ - ribosomal protein L36 (TIGR), at 1,404,246 to 1,404,359 rpmJ DVU1326: rpsM - ribosomal protein S13 (TIGR), at 1,404,378 to 1,404,746 rpsM DVU1327: rpsK - ribosomal protein S11 (TIGR), at 1,404,895 to 1,405,284 rpsK Position (kb) 1403 1404 1405Strain fitness (log2 ratio) -1 0 1at 1404.127 kb on + strandat 1404.141 kb on + strandat 1404.144 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM
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1,404,127 + -0.1
1,404,141 + -0.7
1,404,144 + -0.1

Or see this region's nucleotide sequence