Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1087 and DVU1088 are separated by 46 nucleotides DVU1088 and alaS are separated by 379 nucleotides alaS and recA are separated by 78 nucleotides
DVU1087: DVU1087 - conserved hypothetical protein (TIGR), at 1,190,196 to 1,191,176
DVU1087
DVU1088: DVU1088 - hypothetical protein (TIGR), at 1,191,223 to 1,191,399
DVU1088
DVU1089: alaS - alanyl-tRNA synthetase (TIGR), at 1,191,779 to 1,194,418
alaS
DVU1090: recA - recA protein (TIGR), at 1,194,497 to 1,195,570
recA
Position (kb)
1191
1192
1193
1194
1195 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1190.915 kb on + strand, within DVU1087 at 1190.938 kb on - strand, within DVU1087 at 1190.985 kb on - strand, within DVU1087 at 1191.028 kb on - strand, within DVU1087 at 1191.083 kb on + strand at 1191.083 kb on + strand at 1191.109 kb on + strand at 1191.112 kb on - strand at 1191.117 kb on - strand at 1191.117 kb on - strand at 1191.284 kb on + strand, within DVU1088 at 1191.402 kb on - strand at 1191.402 kb on - strand at 1191.402 kb on - strand at 1191.427 kb on + strand at 1191.435 kb on - strand at 1191.446 kb on - strand at 1191.472 kb on + strand at 1191.480 kb on - strand at 1191.514 kb on - strand at 1191.665 kb on + strand at 1194.429 kb on + strand at 1194.430 kb on - strand at 1194.445 kb on - strand at 1194.447 kb on + strand at 1194.455 kb on - strand at 1194.556 kb on + strand at 1194.666 kb on - strand, within recA at 1194.697 kb on - strand, within recA at 1194.803 kb on - strand, within recA at 1194.865 kb on - strand, within recA
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 1,190,915 + DVU1087 0.73 -0.0 1,190,938 - DVU1087 0.76 +0.5 1,190,985 - DVU1087 0.80 +3.3 1,191,028 - DVU1087 0.85 +0.7 1,191,083 + +0.2 1,191,083 + -0.3 1,191,109 + +0.8 1,191,112 - -1.1 1,191,117 - +0.3 1,191,117 - -0.1 1,191,284 + DVU1088 0.34 -0.3 1,191,402 - -1.0 1,191,402 - -0.2 1,191,402 - -0.1 1,191,427 + +0.0 1,191,435 - -0.1 1,191,446 - -0.2 1,191,472 + -0.0 1,191,480 - -0.2 1,191,514 - -0.3 1,191,665 + -1.3 1,194,429 + -0.1 1,194,430 - -0.6 1,194,445 - +1.7 1,194,447 + +0.7 1,194,455 - +1.0 1,194,556 + +0.5 1,194,666 - recA DVU1090 0.16 -0.0 1,194,697 - recA DVU1090 0.19 -0.2 1,194,803 - recA DVU1090 0.28 +0.7 1,194,865 - recA DVU1090 0.34 -0.6
Or see this region's nucleotide sequence