Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pep* and fur are separated by 76 nucleotides fur and DVU0943 are separated by 493 nucleotides
DVU0941: pep* - metalloprotease, iron-related (Dmitry Rodionov), at 1,031,522 to 1,034,416
pep*
DVU0942: fur - ferric uptake regulator (Dmitry Rodionov), at 1,034,493 to 1,034,927
fur
DVU0943: DVU0943 - membrane protein, putative (TIGR), at 1,035,421 to 1,037,160
DVU0943
Position (kb)
1034
1035 Strain fitness (log2 ratio)
-2
-1
0
1 at 1033.499 kb on + strand, within pep* at 1033.609 kb on + strand, within pep* at 1033.621 kb on + strand, within pep* at 1033.680 kb on - strand, within pep* at 1033.715 kb on + strand, within pep* at 1033.789 kb on + strand, within pep* at 1033.897 kb on + strand, within pep* at 1033.966 kb on - strand, within pep* at 1033.966 kb on - strand, within pep* at 1034.084 kb on - strand, within pep* at 1034.084 kb on - strand, within pep* at 1034.123 kb on - strand, within pep* at 1034.334 kb on + strand at 1034.340 kb on + strand at 1034.450 kb on + strand at 1034.463 kb on - strand at 1034.934 kb on - strand at 1034.937 kb on + strand at 1034.957 kb on - strand at 1035.017 kb on + strand at 1035.101 kb on + strand at 1035.109 kb on - strand at 1035.124 kb on - strand at 1035.158 kb on + strand at 1035.196 kb on + strand at 1035.199 kb on - strand at 1035.259 kb on + strand at 1035.581 kb on + strand at 1035.594 kb on - strand at 1035.605 kb on + strand, within DVU0943 at 1035.638 kb on - strand, within DVU0943 at 1035.648 kb on + strand, within DVU0943 at 1035.656 kb on - strand, within DVU0943 at 1035.675 kb on + strand, within DVU0943 at 1035.683 kb on - strand, within DVU0943 at 1035.683 kb on - strand, within DVU0943 at 1035.792 kb on + strand, within DVU0943 at 1035.927 kb on + strand, within DVU0943 at 1035.927 kb on + strand, within DVU0943
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 1,033,499 + pep* DVU0941 0.68 +1.1 1,033,609 + pep* DVU0941 0.72 +0.3 1,033,621 + pep* DVU0941 0.73 -0.1 1,033,680 - pep* DVU0941 0.75 -0.4 1,033,715 + pep* DVU0941 0.76 -1.9 1,033,789 + pep* DVU0941 0.78 +0.6 1,033,897 + pep* DVU0941 0.82 +0.1 1,033,966 - pep* DVU0941 0.84 -0.0 1,033,966 - pep* DVU0941 0.84 +0.1 1,034,084 - pep* DVU0941 0.88 -1.5 1,034,084 - pep* DVU0941 0.88 +1.6 1,034,123 - pep* DVU0941 0.90 +0.1 1,034,334 + -0.0 1,034,340 + -1.2 1,034,450 + +0.2 1,034,463 - -0.2 1,034,934 - -1.8 1,034,937 + -0.0 1,034,957 - -0.4 1,035,017 + -0.9 1,035,101 + +1.1 1,035,109 - -0.1 1,035,124 - -0.6 1,035,158 + -0.4 1,035,196 + -1.2 1,035,199 - +0.3 1,035,259 + -0.3 1,035,581 + +0.1 1,035,594 - -0.5 1,035,605 + DVU0943 0.11 +0.0 1,035,638 - DVU0943 0.12 -0.3 1,035,648 + DVU0943 0.13 +1.7 1,035,656 - DVU0943 0.14 +0.0 1,035,675 + DVU0943 0.15 +0.2 1,035,683 - DVU0943 0.15 -0.3 1,035,683 - DVU0943 0.15 -0.6 1,035,792 + DVU0943 0.21 +0.4 1,035,927 + DVU0943 0.29 -0.9 1,035,927 + DVU0943 0.29 -0.3
Or see this region's nucleotide sequence