Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0797 and DVU0798 are separated by 59 nucleotides DVU0798 and DVU0799 are separated by 247 nucleotides DVU0799 and uvrC are separated by 422 nucleotides
DVU0797: DVU0797 - conserved hypothetical protein (TIGR), at 882,546 to 883,976
DVU0797
DVU0798: DVU0798 - hypothetical protein (TIGR), at 884,036 to 884,131
DVU0798
DVU0799: DVU0799 - conserved hypothetical protein (TIGR), at 884,379 to 885,779
DVU0799
DVU0801: uvrC - excinuclease ABC, C subunit (TIGR), at 886,202 to 888,310
uvrC
Position (kb) 884
885
886 Strain fitness (log2 ratio) -1
0
1 at 883.381 kb on - strand, within DVU0797 at 883.533 kb on + strand, within DVU0797 at 883.540 kb on - strand, within DVU0797 at 883.541 kb on - strand, within DVU0797 at 883.607 kb on - strand, within DVU0797 at 883.645 kb on - strand, within DVU0797 at 883.701 kb on + strand, within DVU0797 at 883.716 kb on + strand, within DVU0797 at 883.828 kb on + strand, within DVU0797 at 884.061 kb on - strand, within DVU0798 at 884.120 kb on + strand, within DVU0798 at 884.206 kb on - strand at 884.228 kb on - strand at 884.271 kb on + strand at 884.297 kb on - strand at 884.335 kb on - strand at 885.970 kb on - strand at 886.088 kb on + strand at 886.155 kb on - strand at 886.161 kb on - strand at 886.162 kb on - strand at 886.162 kb on - strand at 886.184 kb on + strand at 886.258 kb on + strand at 886.259 kb on - strand at 886.259 kb on - strand at 886.348 kb on + strand at 886.356 kb on - strand at 886.456 kb on - strand, within uvrC at 886.483 kb on + strand, within uvrC at 886.507 kb on + strand, within uvrC at 886.509 kb on + strand, within uvrC at 886.538 kb on + strand, within uvrC at 886.546 kb on - strand, within uvrC at 886.729 kb on - strand, within uvrC at 886.729 kb on - strand, within uvrC at 886.755 kb on + strand, within uvrC at 886.755 kb on + strand, within uvrC
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 883,381 - DVU0797 0.58 -0.9 883,533 + DVU0797 0.69 +0.9 883,540 - DVU0797 0.69 -0.5 883,541 - DVU0797 0.70 +0.1 883,607 - DVU0797 0.74 -0.5 883,645 - DVU0797 0.77 -1.1 883,701 + DVU0797 0.81 -0.0 883,716 + DVU0797 0.82 +0.1 883,828 + DVU0797 0.90 +1.7 884,061 - DVU0798 0.26 -0.8 884,120 + DVU0798 0.88 -1.1 884,206 - -0.2 884,228 - +0.5 884,271 + +0.7 884,297 - +0.1 884,335 - +0.2 885,970 - +0.2 886,088 + +0.2 886,155 - -0.3 886,161 - -0.6 886,162 - -0.3 886,162 - +0.6 886,184 + +0.7 886,258 + -0.3 886,259 - +0.7 886,259 - -0.6 886,348 + -0.2 886,356 - +1.7 886,456 - uvrC DVU0801 0.12 +0.7 886,483 + uvrC DVU0801 0.13 +0.4 886,507 + uvrC DVU0801 0.14 -0.7 886,509 + uvrC DVU0801 0.15 +0.5 886,538 + uvrC DVU0801 0.16 -0.2 886,546 - uvrC DVU0801 0.16 +1.7 886,729 - uvrC DVU0801 0.25 -0.4 886,729 - uvrC DVU0801 0.25 +1.7 886,755 + uvrC DVU0801 0.26 -0.1 886,755 + uvrC DVU0801 0.26 +0.1
Or see this region's nucleotide sequence