Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26740 and BWI76_RS26745 overlap by 32 nucleotides BWI76_RS26745 and BWI76_RS26750 overlap by 8 nucleotides BWI76_RS26750 and BWI76_RS26755 are separated by 183 nucleotides
BWI76_RS26740: BWI76_RS26740 - AsmA family protein, at 5,537,398 to 5,539,449
_RS26740
BWI76_RS26745: BWI76_RS26745 - antibiotic biosynthesis monooxygenase, at 5,539,418 to 5,539,652
_RS26745
BWI76_RS26750: BWI76_RS26750 - PfkB domain-containing protein, at 5,539,645 to 5,540,580
_RS26750
BWI76_RS26755: BWI76_RS26755 - peptidase M16, at 5,540,764 to 5,542,269
_RS26755
Position (kb) 5539
5540
5541 Strain fitness (log2 ratio) -2
-1
0
1 at 5538.895 kb on + strand, within BWI76_RS26740 at 5538.903 kb on - strand, within BWI76_RS26740 at 5539.057 kb on + strand, within BWI76_RS26740 at 5539.369 kb on + strand at 5539.450 kb on - strand, within BWI76_RS26745 at 5539.452 kb on - strand, within BWI76_RS26745 at 5539.452 kb on - strand, within BWI76_RS26745 at 5539.479 kb on + strand, within BWI76_RS26745 at 5539.602 kb on + strand, within BWI76_RS26745 at 5539.610 kb on - strand, within BWI76_RS26745 at 5539.610 kb on - strand, within BWI76_RS26745 at 5539.614 kb on - strand, within BWI76_RS26745 at 5539.615 kb on - strand, within BWI76_RS26745 at 5539.732 kb on + strand at 5539.900 kb on + strand, within BWI76_RS26750 at 5539.900 kb on + strand, within BWI76_RS26750 at 5540.003 kb on - strand, within BWI76_RS26750 at 5540.009 kb on + strand, within BWI76_RS26750 at 5540.024 kb on - strand, within BWI76_RS26750 at 5540.295 kb on - strand, within BWI76_RS26750 at 5540.295 kb on - strand, within BWI76_RS26750 at 5540.635 kb on + strand at 5540.697 kb on + strand at 5540.941 kb on - strand, within BWI76_RS26755 at 5541.095 kb on - strand, within BWI76_RS26755 at 5541.284 kb on - strand, within BWI76_RS26755 at 5541.292 kb on + strand, within BWI76_RS26755 at 5541.426 kb on + strand, within BWI76_RS26755 at 5541.434 kb on - strand, within BWI76_RS26755 at 5541.484 kb on - strand, within BWI76_RS26755
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM remove 5,538,895 + BWI76_RS26740 0.73 +1.0 5,538,903 - BWI76_RS26740 0.73 +0.7 5,539,057 + BWI76_RS26740 0.81 -0.3 5,539,369 + -0.2 5,539,450 - BWI76_RS26745 0.14 -0.2 5,539,452 - BWI76_RS26745 0.14 +0.5 5,539,452 - BWI76_RS26745 0.14 +0.7 5,539,479 + BWI76_RS26745 0.26 +1.1 5,539,602 + BWI76_RS26745 0.78 +0.5 5,539,610 - BWI76_RS26745 0.82 +0.5 5,539,610 - BWI76_RS26745 0.82 +0.6 5,539,614 - BWI76_RS26745 0.83 +0.1 5,539,615 - BWI76_RS26745 0.84 -0.9 5,539,732 + -0.7 5,539,900 + BWI76_RS26750 0.27 -0.9 5,539,900 + BWI76_RS26750 0.27 +1.4 5,540,003 - BWI76_RS26750 0.38 +1.3 5,540,009 + BWI76_RS26750 0.39 +1.1 5,540,024 - BWI76_RS26750 0.40 +0.6 5,540,295 - BWI76_RS26750 0.69 -0.0 5,540,295 - BWI76_RS26750 0.69 +0.2 5,540,635 + -2.4 5,540,697 + +0.2 5,540,941 - BWI76_RS26755 0.12 -0.0 5,541,095 - BWI76_RS26755 0.22 +0.8 5,541,284 - BWI76_RS26755 0.35 -0.3 5,541,292 + BWI76_RS26755 0.35 -0.2 5,541,426 + BWI76_RS26755 0.44 -0.2 5,541,434 - BWI76_RS26755 0.44 +0.3 5,541,484 - BWI76_RS26755 0.48 +0.7
Or see this region's nucleotide sequence