Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24265 and BWI76_RS24270 are separated by 121 nucleotides BWI76_RS24270 and BWI76_RS24275 are separated by 142 nucleotides BWI76_RS24275 and BWI76_RS24280 are separated by 6 nucleotides
BWI76_RS24265: BWI76_RS24265 - dienelactone hydrolase, at 5,056,261 to 5,057,148
_RS24265
BWI76_RS24270: BWI76_RS24270 - membrane protein, at 5,057,270 to 5,057,764
_RS24270
BWI76_RS24275: BWI76_RS24275 - biopolymer transport protein ExbD, at 5,057,907 to 5,058,332
_RS24275
BWI76_RS24280: BWI76_RS24280 - biopolymer transporter ExbB, at 5,058,339 to 5,059,070
_RS24280
Position (kb) 5057
5058 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5056.424 kb on - strand, within BWI76_RS24265 at 5056.535 kb on + strand, within BWI76_RS24265 at 5056.744 kb on + strand, within BWI76_RS24265 at 5056.965 kb on + strand, within BWI76_RS24265 at 5057.008 kb on - strand, within BWI76_RS24265 at 5057.306 kb on - strand at 5057.357 kb on - strand, within BWI76_RS24270 at 5057.554 kb on + strand, within BWI76_RS24270 at 5057.598 kb on + strand, within BWI76_RS24270 at 5057.690 kb on - strand, within BWI76_RS24270 at 5057.794 kb on + strand at 5057.794 kb on + strand at 5057.872 kb on + strand at 5057.879 kb on - strand at 5057.974 kb on + strand, within BWI76_RS24275 at 5057.988 kb on - strand, within BWI76_RS24275 at 5058.135 kb on - strand, within BWI76_RS24275 at 5058.382 kb on - strand at 5058.598 kb on - strand, within BWI76_RS24280 at 5058.746 kb on + strand, within BWI76_RS24280
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM remove 5,056,424 - BWI76_RS24265 0.18 +0.3 5,056,535 + BWI76_RS24265 0.31 -0.9 5,056,744 + BWI76_RS24265 0.54 +2.3 5,056,965 + BWI76_RS24265 0.79 -0.3 5,057,008 - BWI76_RS24265 0.84 +2.1 5,057,306 - +0.2 5,057,357 - BWI76_RS24270 0.18 +0.1 5,057,554 + BWI76_RS24270 0.57 -0.2 5,057,598 + BWI76_RS24270 0.66 -2.0 5,057,690 - BWI76_RS24270 0.85 -1.5 5,057,794 + +0.3 5,057,794 + -0.6 5,057,872 + +0.3 5,057,879 - -0.5 5,057,974 + BWI76_RS24275 0.16 +0.4 5,057,988 - BWI76_RS24275 0.19 +1.5 5,058,135 - BWI76_RS24275 0.54 -0.2 5,058,382 - +0.4 5,058,598 - BWI76_RS24280 0.35 -0.2 5,058,746 + BWI76_RS24280 0.56 +0.7
Or see this region's nucleotide sequence