Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35540

Experiment: Hexanoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hexanoic (C)
3,425,807	+				+0.0
3,425,807	+				-0.4
3,425,808	-				+1.2
3,425,859	-				+0.6
3,425,897	-				-0.5
3,425,897	-				+0.7
3,425,897	-				-0.9
3,425,909	-				+0.4
3,425,970	+				+3.0
3,425,971	-				+0.8
3,425,971	-				-1.6
3,426,007	-				-1.7
3,426,007	-				-0.2
3,426,007	-				+0.7
3,426,015	+				-0.2
3,426,015	+				-0.2
3,426,060	-				+0.0
3,426,060	-				-0.6
3,426,060	-				+0.2
3,426,131	-				+1.6
3,426,131	-				-0.6
3,426,131	-				+0.7
3,426,134	-				+1.1
3,426,134	-				-1.9
3,426,278	+				-0.6
3,426,278	+				-1.1
3,426,278	+				-0.1
3,426,298	+		RR42_RS35535	0.14	-0.6
3,426,298	+		RR42_RS35535	0.14	+0.3
3,426,299	-		RR42_RS35535	0.15	+0.8
3,426,299	-		RR42_RS35535	0.15	+0.1
3,426,299	-		RR42_RS35535	0.15	+0.4
3,426,299	-		RR42_RS35535	0.15	+0.4
3,426,344	-		RR42_RS35535	0.27	+0.6
3,426,371	+		RR42_RS35535	0.34	+0.5
3,426,426	+		RR42_RS35535	0.49	-0.7
3,426,427	-		RR42_RS35535	0.49	-0.2
3,426,427	-		RR42_RS35535	0.49	+0.8
3,426,427	-		RR42_RS35535	0.49	-0.8
3,426,472	+		RR42_RS35535	0.62	+0.8
3,426,473	-		RR42_RS35535	0.62	+0.4
3,426,477	+		RR42_RS35535	0.63	+0.4
3,426,627	+				-0.2
3,426,643	+				+1.0
3,426,643	+				+0.5
3,426,645	+				-0.3
3,426,645	+				-0.1
3,426,666	+				-0.7
3,426,666	+				-0.6
3,426,666	+				-1.5
3,426,767	+				+0.3
3,426,770	+				-0.7
3,426,770	+				+0.2
3,426,770	+				+0.3
3,426,770	+				-0.4
3,426,770	+				+1.4
3,426,771	-				+0.2
3,426,771	-				-0.4
3,426,849	-				-0.2
3,426,849	-				+0.4
3,426,875	+				-0.1
3,426,876	-				-0.2
3,426,917	+		RR42_RS35540	0.14	+0.1
3,426,917	+		RR42_RS35540	0.14	-0.2
3,426,917	+		RR42_RS35540	0.14	-0.8
3,426,918	-		RR42_RS35540	0.14	-0.1
3,426,974	+		RR42_RS35540	0.19	+0.5
3,426,974	+		RR42_RS35540	0.19	+1.1
3,426,974	+		RR42_RS35540	0.19	+2.0
3,426,975	-		RR42_RS35540	0.19	+1.2
3,426,975	-		RR42_RS35540	0.19	-0.0
3,426,977	+		RR42_RS35540	0.19	-0.4
3,426,978	-		RR42_RS35540	0.19	-0.2
3,427,017	-		RR42_RS35540	0.23	+0.6
3,427,136	+		RR42_RS35540	0.34	-0.3
3,427,136	+		RR42_RS35540	0.34	+0.7
3,427,199	+		RR42_RS35540	0.39	-0.9
3,427,309	-		RR42_RS35540	0.50	-0.1
3,427,331	+		RR42_RS35540	0.52	-0.1
3,427,331	+		RR42_RS35540	0.52	+0.5
3,427,332	-		RR42_RS35540	0.52	+1.2
3,427,332	-		RR42_RS35540	0.52	+0.1
3,427,332	-		RR42_RS35540	0.52	+1.2
3,427,332	-		RR42_RS35540	0.52	-0.1
3,427,370	+		RR42_RS35540	0.55	+0.9
3,427,370	+		RR42_RS35540	0.55	-1.1
3,427,370	+		RR42_RS35540	0.55	+0.3
3,427,370	+		RR42_RS35540	0.55	-0.2
3,427,370	+		RR42_RS35540	0.55	-0.2
3,427,371	-		RR42_RS35540	0.55	-0.8
3,427,430	+		RR42_RS35540	0.61	+0.4
3,427,431	-		RR42_RS35540	0.61	-0.1
3,427,457	+		RR42_RS35540	0.63	+0.9
3,427,458	-		RR42_RS35540	0.63	-0.5
3,427,535	+		RR42_RS35540	0.70	+0.7
3,427,535	+		RR42_RS35540	0.70	-1.0
3,427,535	+		RR42_RS35540	0.70	-1.6
3,427,535	+		RR42_RS35540	0.70	+0.1
3,427,536	-		RR42_RS35540	0.70	-0.6
3,427,536	-		RR42_RS35540	0.70	+0.5
3,427,536	-		RR42_RS35540	0.70	+0.2
3,427,536	-		RR42_RS35540	0.70	+0.0
3,427,536	-		RR42_RS35540	0.70	-0.4
3,427,560	+		RR42_RS35540	0.73	-0.9
3,427,560	+		RR42_RS35540	0.73	+0.6
3,427,561	-		RR42_RS35540	0.73	-1.1
3,427,588	-		RR42_RS35540	0.75	-0.2
3,427,606	+		RR42_RS35540	0.77	+0.7
3,427,614	+		RR42_RS35540	0.78	+0.0
3,427,614	+		RR42_RS35540	0.78	-0.5
3,427,614	+		RR42_RS35540	0.78	-1.9
3,427,615	-		RR42_RS35540	0.78	-0.1
3,427,615	-		RR42_RS35540	0.78	-1.7
3,427,740	-		RR42_RS35540	0.89	+3.0
3,427,740	-		RR42_RS35540	0.89	+0.6
3,427,767	-				+0.0
3,427,887	+				-0.0
3,427,888	-				-0.6
3,427,888	-				-0.0
3,427,888	-				-2.1
3,427,888	-				+0.0
3,427,921	-				-2.4
3,427,951	+				+0.1
3,427,951	+				-0.8
3,427,951	+				-0.2
3,427,951	+				+0.1
3,427,951	+				-0.9
3,427,951	+				-0.0
3,427,952	-				-0.9
3,427,952	-				+0.4
3,427,952	-				+0.4
3,427,952	-				+0.8
3,427,952	-				-1.3
3,427,961	+				+0.1
3,427,964	+				+0.0
3,427,964	+				-0.2
3,427,985	-				+0.1
3,428,033	+				-1.1
3,428,033	+				-0.5
3,428,033	+				+0.1
3,428,033	+				+1.0
3,428,034	-				+1.1
3,428,034	-				-0.1
3,428,034	-				+0.7
3,428,035	+				+1.1
3,428,035	+				+0.4
3,428,035	+				-0.1
3,428,035	+				-0.5
3,428,035	+				-0.2
3,428,035	+				+0.7
3,428,035	+				-0.7
3,428,035	+				-1.2
3,428,035	+				+1.1
3,428,035	+				-0.2
3,428,035	+				+0.5
3,428,035	+				+0.4
3,428,036	-				-0.2
3,428,036	-				+1.4
3,428,036	-				+0.4
3,428,036	-				-0.7
3,428,036	-				+1.8
3,428,036	-				+2.3
3,428,036	-				+1.4
3,428,036	-				+2.4
3,428,036	-				+0.2
3,428,071	+				-0.2
3,428,072	-				+0.2
3,428,072	-				+0.6
3,428,123	+				-1.2
3,428,124	-				-0.6
3,428,129	+				-1.8
3,428,129	+				-0.2
3,428,129	+				-0.5
3,428,130	-				-0.2
3,428,203	-				-1.3
3,428,216	+				+0.4
3,428,216	+				+0.2
3,428,216	+				-0.3
3,428,217	-				-0.1
3,428,217	-				-1.3
3,428,217	-				+0.7
3,428,276	-				+0.5
3,428,293	+				+0.4
3,428,293	+				+0.7
3,428,293	+				+0.2
3,428,293	+				-0.4
3,428,302	+				-0.2
3,428,302	+				-0.3
3,428,320	+				-0.3
3,428,320	+				+0.2
3,428,321	-				-0.5
3,428,321	-				+0.6
3,428,321	-				-0.2
3,428,339	+				-0.1
3,428,340	-				+0.4
3,428,358	-				+1.0
3,428,375	+				+0.7
3,428,577	+				+0.5
3,428,674	+				+0.3
3,428,675	-				-0.6
3,428,675	-				+0.3
3,428,675	-				+0.2
3,428,756	+				-0.3
3,428,757	-				+0.3
3,428,849	+				-0.1