Strain Fitness in Marinobacter adhaerens HP15 around HP15_3679

Experiment: Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3677 and HP15_3678 are separated by 241 nucleotidesHP15_3678 and HP15_3679 are separated by 47 nucleotidesHP15_3679 and HP15_3680 are separated by 55 nucleotidesHP15_3680 and HP15_3681 are separated by 75 nucleotides HP15_3677: HP15_3677 - bifunctional protein GlmU, at 3,876,931 to 3,878,199 _3677 HP15_3678: HP15_3678 - ATP synthase epsilon chain, at 3,878,441 to 3,878,863 _3678 HP15_3679: HP15_3679 - ATP synthase subunit beta, at 3,878,911 to 3,880,305 _3679 HP15_3680: HP15_3680 - ATP synthase gamma chain, at 3,880,361 to 3,881,224 _3680 HP15_3681: HP15_3681 - ATP synthase F1, alpha subunit, at 3,881,300 to 3,882,844 _3681 Position (kb) 3878 3879 3880 3881Strain fitness (log2 ratio) -1 0 1at 3878.323 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15
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3,878,323 - +0.5

Or see this region's nucleotide sequence