Strain Fitness in Marinobacter adhaerens HP15 around HP15_564

Experiment: Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_563 and HP15_564 overlap by 8 nucleotidesHP15_564 and HP15_565 overlap by 8 nucleotides HP15_563: HP15_563 - cell division protein FtsW-like protein, at 583,955 to 585,154 _563 HP15_564: HP15_564 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase), at 585,147 to 586,232 _564 HP15_565: HP15_565 - UDP-N-acetylmuramate-L-alanine ligase, at 586,225 to 587,670 _565 Position (kb) 585 586 587Strain fitness (log2 ratio) -1 0 1at 585.098 kb on + strandat 585.133 kb on + strandat 585.143 kb on + strandat 585.143 kb on + strandat 585.143 kb on + strandat 585.143 kb on + strandat 586.210 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15
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585,098 + -0.6
585,133 + -0.1
585,143 + -0.3
585,143 + +1.4
585,143 + -0.8
585,143 + +0.2
586,210 + +0.4

Or see this region's nucleotide sequence