Strain Fitness in Marinobacter adhaerens HP15 around HP15_3700

Experiment: Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3699 and HP15_3700 are separated by 297 nucleotidesHP15_3700 and HP15_3701 are separated by 14 nucleotidesHP15_3701 and HP15_3702 are separated by 657 nucleotides HP15_3699: HP15_3699 - inner membrane protein translocase component YidC, at 3,902,781 to 3,904,496 _3699 HP15_3700: HP15_3700 - ribonuclease P protein component, at 3,904,794 to 3,905,201 _3700 HP15_3701: HP15_3701 - ribosomal protein L34, at 3,905,216 to 3,905,350 _3701 HP15_3702: HP15_3702 - chromosomal replication initiation protein, at 3,906,008 to 3,907,450 _3702 Position (kb) 3904 3905 3906Strain fitness (log2 ratio) -2 -1 0 1at 3905.708 kb on + strandat 3905.748 kb on + strandat 3905.748 kb on + strandat 3905.749 kb on + strandat 3905.757 kb on - strandat 3905.757 kb on - strandat 3905.758 kb on - strandat 3905.758 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15
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3,905,708 + +0.6
3,905,748 + -0.1
3,905,748 + -0.0
3,905,749 + -2.1
3,905,757 - -0.3
3,905,757 - -1.3
3,905,758 - +1.2
3,905,758 - -0.7

Or see this region's nucleotide sequence