Strain Fitness in Marinobacter adhaerens HP15 around HP15_3685

Experiment: Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3682 and HP15_3683 are separated by 15 nucleotidesHP15_3683 and HP15_3684 are separated by 87 nucleotidesHP15_3684 and HP15_3685 are separated by 93 nucleotidesHP15_3685 and HP15_3686 are separated by 19 nucleotidesHP15_3686 and HP15_3687 are separated by 338 nucleotides HP15_3682: HP15_3682 - ATPase, F1 complex, OSCP/delta subunit, at 3,882,873 to 3,883,409 _3682 HP15_3683: HP15_3683 - ATPase, F0 complex, subunit B, bacterial, at 3,883,425 to 3,883,877 _3683 HP15_3684: HP15_3684 - ATPase, F0 complex, subunit C, bacterial and chloroplast, at 3,883,965 to 3,884,204 _3684 HP15_3685: HP15_3685 - F0F1 ATP synthase subunit A, at 3,884,298 to 3,885,170 _3685 HP15_3686: HP15_3686 - F0F1 ATP synthase subunit I, at 3,885,190 to 3,885,522 _3686 HP15_3687: HP15_3687 - ParB family protein, at 3,885,861 to 3,886,748 _3687 Position (kb) 3884 3885 3886Strain fitness (log2 ratio) -1 0 1at 3883.935 kb on - strandat 3884.277 kb on - strandat 3884.290 kb on - strandat 3885.673 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15
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3,883,935 - +0.4
3,884,277 - -0.7
3,884,290 - -0.4
3,885,673 - +0.4

Or see this region's nucleotide sequence