Strain Fitness in Marinobacter adhaerens HP15 around HP15_3079

Experiment: Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3078 and HP15_3079 are separated by 194 nucleotidesHP15_3079 and HP15_3080 are separated by 26 nucleotides HP15_3078: HP15_3078 - carbamoyl-phosphate synthase small chain, at 3,233,588 to 3,234,718 _3078 HP15_3079: HP15_3079 - dihydrodipicolinate reductase, at 3,234,913 to 3,235,713 _3079 HP15_3080: HP15_3080 - chaperone protein dnaJ, at 3,235,740 to 3,236,867 _3080 Position (kb) 3234 3235 3236Strain fitness (log2 ratio) -2 -1 0 1at 3234.489 kb on - strand, within HP15_3078at 3235.808 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15
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3,234,489 - HP15_3078 0.80 -2.5
3,235,808 - -0.3

Or see this region's nucleotide sequence