Strain Fitness in Marinobacter adhaerens HP15 around HP15_2214

Experiment: Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2212 and HP15_2213 are separated by 133 nucleotidesHP15_2213 and HP15_2214 are separated by 18 nucleotidesHP15_2214 and HP15_2215 are separated by 154 nucleotides HP15_2212: HP15_2212 - Acyl carrier protein, at 2,330,504 to 2,330,737 _2212 HP15_2213: HP15_2213 - 3-ketoacyl-(acyl-carrier-protein) reductase, at 2,330,871 to 2,331,614 _2213 HP15_2214: HP15_2214 - acyl-carrier-protein S-malonyltransferase, at 2,331,633 to 2,332,529 _2214 HP15_2215: HP15_2215 - fatty acid/phospholipid synthesis protein PlsX, at 2,332,684 to 2,333,685 _2215 Position (kb) 2331 2332 2333Strain fitness (log2 ratio) -1 0 1at 2330.876 kb on - strandat 2332.656 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15
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2,330,876 - -1.4
2,332,656 + +0.7

Or see this region's nucleotide sequence