Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08145

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS08140 and RR42_RS08145 are separated by 523 nucleotidesRR42_RS08145 and RR42_RS08150 are separated by 833 nucleotides RR42_RS08140: RR42_RS08140 - hypothetical protein, at 1,736,102 to 1,736,665 _RS08140 RR42_RS08145: RR42_RS08145 - hypothetical protein, at 1,737,189 to 1,737,401 _RS08145 RR42_RS08150: RR42_RS08150 - hypothetical protein, at 1,738,235 to 1,738,459 _RS08150 Position (kb) 1737 1738Strain fitness (log2 ratio) -1 0 1at 1737.274 kb on - strand, within RR42_RS08145at 1737.539 kb on - strandat 1737.568 kb on - strandat 1737.713 kb on - strandat 1737.713 kb on - strandat 1737.775 kb on - strandat 1737.928 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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1,737,274 - RR42_RS08145 0.40 -0.4
1,737,539 - +0.2
1,737,568 - -0.8
1,737,713 - -1.4
1,737,713 - -0.5
1,737,775 - -0.3
1,737,928 - +0.1

Or see this region's nucleotide sequence