Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1477

Experiment: KB with Carnitine (Dl) Hydrochloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carnitine (Dl) Hydrochloride 10 mM
1,665,196	+				-0.6
1,665,196	+				-0.1
1,665,197	-				-0.1
1,665,197	-				+0.1
1,665,197	-				-0.1
1,665,197	-				-1.9
1,665,305	+				+0.6
1,665,305	+				-2.4
1,665,305	+				+0.1
1,665,305	+				-1.1
1,665,305	+				-0.6
1,665,306	-				+0.2
1,665,318	+				+0.1
1,665,319	-				+0.5
1,665,365	+				+0.7
1,665,365	+				+0.8
1,665,383	+				-1.0
1,665,383	+				+0.4
1,665,383	+				+1.3
1,665,383	+				+0.1
1,665,383	+				+0.6
1,665,384	-				+0.1
1,665,384	-				+0.5
1,665,384	-				-1.3
1,665,384	-				+0.1
1,665,384	-				-0.1
1,665,384	-				-0.8
1,665,408	+				+0.3
1,665,408	+				-0.7
1,665,409	-				+1.5
1,665,409	-				-0.0
1,665,409	-				+0.3
1,665,456	+				-0.4
1,665,456	+				-0.4
1,665,456	+				+0.1
1,665,457	-				+0.3
1,665,459	+				-2.5
1,665,459	+				+2.3
1,665,460	-				+0.6
1,665,460	-				+0.3
1,665,460	-				-0.6
1,665,460	-				+2.0
1,665,463	+				-0.2
1,665,464	-				+0.6
1,665,464	-				-0.4
1,665,464	-				+0.5
1,665,464	-				-2.2
1,665,519	+		Psyr_1476	0.12	-0.5
1,665,534	+		Psyr_1476	0.16	-0.8
1,665,535	-		Psyr_1476	0.17	+0.3
1,665,535	-		Psyr_1476	0.17	-0.5
1,665,552	-		Psyr_1476	0.21	-0.2
1,665,552	-		Psyr_1476	0.21	+0.1
1,665,569	+		Psyr_1476	0.25	+1.5
1,665,569	+		Psyr_1476	0.25	+0.1
1,665,569	+		Psyr_1476	0.25	-1.3
1,665,569	+		Psyr_1476	0.25	-1.1
1,665,569	+		Psyr_1476	0.25	-1.9
1,665,570	-		Psyr_1476	0.26	-0.9
1,665,570	-		Psyr_1476	0.26	+0.6
1,665,570	-		Psyr_1476	0.26	-1.2
1,665,570	-		Psyr_1476	0.26	-0.2
1,665,570	-		Psyr_1476	0.26	+0.0
1,665,611	+		Psyr_1476	0.36	-0.1
1,665,612	-		Psyr_1476	0.37	+1.3
1,665,612	-		Psyr_1476	0.37	+0.4
1,665,612	-		Psyr_1476	0.37	+0.2
1,665,612	-		Psyr_1476	0.37	-0.8
1,665,612	-		Psyr_1476	0.37	-0.2
1,665,612	-		Psyr_1476	0.37	+0.3
1,665,714	+		Psyr_1476	0.64	+0.9
1,665,714	+		Psyr_1476	0.64	-1.8
1,665,715	-		Psyr_1476	0.64	+0.9
1,665,715	-		Psyr_1476	0.64	-1.2
1,665,715	-		Psyr_1476	0.64	-0.7
1,665,715	-		Psyr_1476	0.64	+1.1
1,665,715	-		Psyr_1476	0.64	+0.9
1,665,715	-		Psyr_1476	0.64	+0.8
1,665,716	+		Psyr_1476	0.64	+1.5
1,665,716	+		Psyr_1476	0.64	+1.5
1,665,717	-		Psyr_1476	0.64	+2.5
1,665,717	-		Psyr_1476	0.64	-0.6
1,665,717	-		Psyr_1476	0.64	-1.4
1,665,727	-		Psyr_1476	0.67	-0.3
1,665,745	+		Psyr_1476	0.72	-0.9
1,665,746	-		Psyr_1476	0.72	-0.8
1,665,852	+				-2.1
1,665,852	+				-1.9
1,665,852	+				-1.3
1,665,852	+				-0.6
1,665,852	+				-1.9
1,665,852	+				-2.2
1,665,852	+				+1.5
1,665,852	+				-0.5
1,665,852	+				-0.8
1,665,852	+				-1.5
1,665,852	+				-0.5
1,665,852	+				-0.5
1,665,853	-				+0.6
1,665,853	-				+0.3
1,665,853	-				-0.1
1,665,853	-				+0.3
1,665,853	-				-1.2
1,665,853	-				+0.1
1,665,853	-				-0.5
1,665,853	-				-0.4
1,665,853	-				-0.4
1,665,853	-				+0.4
1,665,853	-				+0.9
1,665,853	-				+0.1
1,665,853	-				-0.1
1,665,853	-				+0.3
1,665,853	-				+0.1
1,665,853	-				+0.1
1,665,856	+				-1.3
1,665,856	+				-2.8
1,665,856	+				+3.1
1,665,856	+				+0.5
1,665,856	+				+1.8
1,665,857	-				-0.7
1,665,857	-				-1.4
1,665,857	-				-0.9
1,665,857	-				-0.9
1,665,857	-				-1.6
1,665,857	-				-0.6
1,665,857	-				-0.4
1,665,857	-				+0.1
1,665,882	+				-0.5
1,665,924	+				-1.8
1,665,924	+				-0.6
1,665,925	-				-0.2
1,665,925	-				+0.6
1,665,925	-				-0.5
1,665,925	-				-0.4
1,665,925	-				+0.3
1,665,925	-				-0.6
1,665,944	+				-0.3
1,665,945	-				+0.1
1,665,945	-				-1.4
1,665,958	-				+1.2
1,666,124	+				+0.5
1,666,127	+				-0.1
1,666,128	-				-0.6
1,666,238	+				-0.3
1,666,239	-				+0.0
1,666,239	-				+0.2
1,666,239	-				+0.9
1,666,239	-				+0.3
1,666,261	+				+0.6
1,666,261	+				+0.9
1,666,261	+				-2.6
1,666,261	+				-1.0
1,666,261	+				-0.4
1,666,261	+				+0.1
1,666,261	+				+0.6
1,666,261	+				-0.7
1,666,261	+				-0.6
1,666,261	+				-0.1
1,666,262	-				+0.5
1,666,262	-				+1.0
1,666,262	-				-0.1
1,666,262	-				+0.1
1,666,262	-				-0.7
1,666,262	-				+1.1
1,666,262	-				-0.3
1,666,390	+		Psyr_1477	0.21	-0.1
1,666,390	+		Psyr_1477	0.21	+0.2
1,666,516	+		Psyr_1477	0.34	-0.2
1,666,516	+		Psyr_1477	0.34	+0.4
1,666,589	+		Psyr_1477	0.41	+0.2
1,666,590	-		Psyr_1477	0.41	+1.4
1,666,613	+		Psyr_1477	0.43	-0.9
1,666,614	-		Psyr_1477	0.44	+0.1
1,666,642	+		Psyr_1477	0.46	-1.2
1,666,643	-		Psyr_1477	0.46	-1.9
1,666,643	-		Psyr_1477	0.46	-0.7
1,666,666	-		Psyr_1477	0.49	-1.6
1,666,701	+		Psyr_1477	0.52	-1.3
1,666,711	-		Psyr_1477	0.53	+1.5
1,666,711	-		Psyr_1477	0.53	-0.3
1,666,771	+		Psyr_1477	0.59	-2.5
1,666,830	-		Psyr_1477	0.65	-0.1
1,666,845	+		Psyr_1477	0.67	-2.0
1,666,897	+		Psyr_1477	0.72	-0.9
1,666,897	+		Psyr_1477	0.72	-0.1
1,666,897	+		Psyr_1477	0.72	-2.3
1,666,898	-		Psyr_1477	0.72	-0.1
1,666,898	-		Psyr_1477	0.72	+0.2
1,666,898	-		Psyr_1477	0.72	+0.5
1,666,898	-		Psyr_1477	0.72	+0.8
1,666,898	-		Psyr_1477	0.72	-1.6
1,666,898	-		Psyr_1477	0.72	+0.8
1,666,898	-		Psyr_1477	0.72	-0.1
1,666,898	-		Psyr_1477	0.72	+0.5
1,666,929	-		Psyr_1477	0.75	-0.1
1,666,929	-		Psyr_1477	0.75	-0.5
1,666,929	-		Psyr_1477	0.75	+0.1
1,666,971	-		Psyr_1477	0.79	-1.1
1,666,987	+		Psyr_1477	0.81	+1.1
1,666,987	+		Psyr_1477	0.81	-2.1
1,666,987	+		Psyr_1477	0.81	-0.8
1,666,987	+		Psyr_1477	0.81	-0.1
1,666,995	+		Psyr_1477	0.82	+1.5
1,666,995	+		Psyr_1477	0.82	+0.3
1,666,995	+		Psyr_1477	0.82	-2.2
1,666,996	-		Psyr_1477	0.82	-0.5
1,666,996	-		Psyr_1477	0.82	+0.1
1,667,014	+		Psyr_1477	0.84	+1.5
1,667,014	+		Psyr_1477	0.84	-1.3
1,667,015	-		Psyr_1477	0.84	-1.5
1,667,015	-		Psyr_1477	0.84	+0.2
1,667,015	-		Psyr_1477	0.84	-2.4
1,667,070	-		Psyr_1477	0.89	-0.1
1,667,189	-				+0.1
1,667,189	-				+0.5
1,667,193	+				+0.5
1,667,194	-				+0.0
1,667,222	+				-2.4
1,667,222	+				+0.3
1,667,222	+				+0.6
1,667,223	-				+1.0
1,667,223	-				-0.2
1,667,224	+				-0.4
1,667,224	+				+0.2
1,667,224	+				-0.0
1,667,224	+				-0.1
1,667,224	+				-0.4
1,667,224	+				+0.8
1,667,224	+				-0.6
1,667,224	+				+0.2
1,667,224	+				+0.1
1,667,224	+				+0.8
1,667,224	+				-1.6
1,667,224	+				-0.8
1,667,224	+				+0.3
1,667,224	+				-1.9
1,667,224	+				-0.3
1,667,224	+				+0.2
1,667,224	+				+1.4
1,667,224	+				-1.1
1,667,224	+				+0.3
1,667,224	+				-1.0
1,667,224	+				+0.5
1,667,224	+				+0.3
1,667,224	+				-0.8
1,667,224	+				+0.6
1,667,225	-				-0.9
1,667,225	-				+0.4
1,667,225	-				+1.5
1,667,225	-				-0.7
1,667,225	-				-0.0
1,667,225	-				+1.2
1,667,225	-				-1.5
1,667,225	-				-0.2
1,667,225	-				+0.4
1,667,225	-				-2.6
1,667,225	-				-0.3
1,667,225	-				+0.7
1,667,225	-				-0.5
1,667,225	-				+0.4
1,667,225	-				-2.1
1,667,225	-				+0.3
1,667,225	-				-0.6
1,667,225	-				+0.1
1,667,225	-				+0.3
1,667,225	-				+0.5
1,667,225	-				-0.7
1,667,262	+				+0.5
1,667,262	+				+0.2
1,667,263	-				+0.2
1,667,275	+				-0.7
1,667,275	+				-1.6
1,667,276	-				-1.4
1,667,308	+		Psyr_1478	0.12	+1.7
1,667,309	-		Psyr_1478	0.12	-0.1
1,667,319	+		Psyr_1478	0.13	-0.5
1,667,320	-		Psyr_1478	0.13	+2.9
1,667,323	+		Psyr_1478	0.13	-0.2
1,667,323	+		Psyr_1478	0.13	-2.8
1,667,329	+		Psyr_1478	0.14	-1.0
1,667,329	+		Psyr_1478	0.14	+0.6
1,667,330	-		Psyr_1478	0.14	+0.3
1,667,393	+		Psyr_1478	0.20	+0.4
1,667,393	+		Psyr_1478	0.20	+1.8
1,667,393	+		Psyr_1478	0.20	-0.1
1,667,393	+		Psyr_1478	0.20	-0.6
1,667,393	+		Psyr_1478	0.20	+1.4
1,667,393	+		Psyr_1478	0.20	-1.6
1,667,393	+		Psyr_1478	0.20	-0.1
1,667,393	+		Psyr_1478	0.20	-0.6
1,667,393	+		Psyr_1478	0.20	+0.9
1,667,393	+		Psyr_1478	0.20	-1.1
1,667,393	+		Psyr_1478	0.20	+0.7
1,667,393	+		Psyr_1478	0.20	-1.1
1,667,393	+		Psyr_1478	0.20	+1.3
1,667,393	+		Psyr_1478	0.20	+0.7
1,667,393	+		Psyr_1478	0.20	+0.4
1,667,393	+		Psyr_1478	0.20	+0.4
1,667,394	-		Psyr_1478	0.20	-0.3
1,667,394	-		Psyr_1478	0.20	+0.7
1,667,394	-		Psyr_1478	0.20	-0.8
1,667,394	-		Psyr_1478	0.20	-2.4
1,667,394	-		Psyr_1478	0.20	+0.2
1,667,394	-		Psyr_1478	0.20	+0.3
1,667,394	-		Psyr_1478	0.20	+2.3
1,667,394	-		Psyr_1478	0.20	+0.1
1,667,394	-		Psyr_1478	0.20	-0.1
1,667,394	-		Psyr_1478	0.20	+0.1
1,667,394	-		Psyr_1478	0.20	+1.5
1,667,394	-		Psyr_1478	0.20	-0.7
1,667,394	-		Psyr_1478	0.20	+1.2
1,667,394	-		Psyr_1478	0.20	+0.5
1,667,394	-		Psyr_1478	0.20	+0.9
1,667,394	-		Psyr_1478	0.20	-0.4
1,667,479	+		Psyr_1478	0.28	+0.8
1,667,480	-		Psyr_1478	0.28	+0.4
1,667,480	-		Psyr_1478	0.28	-0.3
1,667,480	-		Psyr_1478	0.28	+0.0
1,667,647	+		Psyr_1478	0.44	-0.1
1,667,693	-		Psyr_1478	0.49	-0.9
1,667,740	+		Psyr_1478	0.53	+1.5
1,667,797	-		Psyr_1478	0.59	-1.9
1,667,884	+		Psyr_1478	0.67	-0.5
1,667,884	+		Psyr_1478	0.67	-2.1
1,667,884	+		Psyr_1478	0.67	+1.5
1,667,884	+		Psyr_1478	0.67	-0.1
1,667,885	-		Psyr_1478	0.67	+0.2
1,667,885	-		Psyr_1478	0.67	-1.6
1,667,885	-		Psyr_1478	0.67	+0.4
1,667,885	-		Psyr_1478	0.67	+0.4
1,667,885	-		Psyr_1478	0.67	-0.5
1,667,885	-		Psyr_1478	0.67	+2.5
1,667,885	-		Psyr_1478	0.67	-1.2
1,667,885	-		Psyr_1478	0.67	+1.3
1,667,912	+		Psyr_1478	0.70	-1.9
1,667,912	+		Psyr_1478	0.70	-1.1
1,667,912	+		Psyr_1478	0.70	-1.6
1,667,912	+		Psyr_1478	0.70	+1.5
1,667,912	+		Psyr_1478	0.70	-1.5
1,667,912	+		Psyr_1478	0.70	-0.8
1,667,912	+		Psyr_1478	0.70	-2.8
1,667,912	+		Psyr_1478	0.70	+0.5
1,667,913	-		Psyr_1478	0.70	+1.7
1,667,913	-		Psyr_1478	0.70	+0.9
1,667,913	-		Psyr_1478	0.70	+0.9
1,667,913	-		Psyr_1478	0.70	+0.7
1,667,913	-		Psyr_1478	0.70	-0.7
1,667,913	-		Psyr_1478	0.70	+0.8
1,667,913	-		Psyr_1478	0.70	-1.4
1,667,913	-		Psyr_1478	0.70	-1.8
1,667,913	-		Psyr_1478	0.70	+0.3
1,667,913	-		Psyr_1478	0.70	-0.8
1,667,913	-		Psyr_1478	0.70	-0.3
1,667,913	-		Psyr_1478	0.70	+0.9
1,667,928	+		Psyr_1478	0.71	-1.8
1,667,929	-		Psyr_1478	0.71	-0.4
1,667,989	+		Psyr_1478	0.77	+3.3
1,667,989	+		Psyr_1478	0.77	-1.6
1,667,990	-		Psyr_1478	0.77	-2.2
1,667,990	-		Psyr_1478	0.77	-0.5
1,667,990	-		Psyr_1478	0.77	+0.3
1,668,058	+		Psyr_1478	0.84	-0.9
1,668,058	+		Psyr_1478	0.84	-0.5