Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34570

Experiment: DinoMM minimal media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DinoMM minimal media
3,624,776	+		PGA1_c34560	0.43	-1.2
3,624,776	+		PGA1_c34560	0.43	-0.6
3,624,784	-		PGA1_c34560	0.43	-1.2
3,624,784	-		PGA1_c34560	0.43	+1.0
3,624,784	-		PGA1_c34560	0.43	+0.2
3,624,784	-		PGA1_c34560	0.43	-1.9
3,624,858	-		PGA1_c34560	0.48	-1.2
3,624,862	+		PGA1_c34560	0.48	-0.0
3,624,886	+		PGA1_c34560	0.50	-0.7
3,624,886	+		PGA1_c34560	0.50	+1.1
3,624,894	-		PGA1_c34560	0.50	-1.3
3,624,903	+		PGA1_c34560	0.51	-1.4
3,624,930	-		PGA1_c34560	0.53	+0.3
3,624,955	-		PGA1_c34560	0.54	-1.2
3,624,991	+		PGA1_c34560	0.56	+1.5
3,624,994	-		PGA1_c34560	0.57	-0.1
3,624,996	+		PGA1_c34560	0.57	-0.3
3,625,022	-		PGA1_c34560	0.58	-0.1
3,625,050	+		PGA1_c34560	0.60	-0.6
3,625,070	+		PGA1_c34560	0.62	-0.2
3,625,072	-		PGA1_c34560	0.62	-1.8
3,625,112	+		PGA1_c34560	0.64	-0.4
3,625,119	+		PGA1_c34560	0.65	-2.0
3,625,120	-		PGA1_c34560	0.65	-0.6
3,625,122	-		PGA1_c34560	0.65	+0.4
3,625,201	-		PGA1_c34560	0.70	-0.0
3,625,286	+		PGA1_c34560	0.75	-0.8
3,625,286	+		PGA1_c34560	0.75	-2.0
3,625,294	-		PGA1_c34560	0.76	-1.4
3,625,359	+		PGA1_c34560	0.80	-1.7
3,625,359	+		PGA1_c34560	0.80	-0.6
3,625,367	+		PGA1_c34560	0.81	-0.9
3,625,367	-		PGA1_c34560	0.81	-1.4
3,625,375	-		PGA1_c34560	0.81	-2.3
3,625,379	+		PGA1_c34560	0.81	-1.2
3,625,385	+		PGA1_c34560	0.82	+0.8
3,625,392	+		PGA1_c34560	0.82	-1.6
3,625,426	-		PGA1_c34560	0.84	+1.0
3,625,446	+		PGA1_c34560	0.86	-0.1
3,625,446	+		PGA1_c34560	0.86	+0.8
3,625,446	+		PGA1_c34560	0.86	-0.7
3,625,446	+		PGA1_c34560	0.86	+0.4
3,625,446	+		PGA1_c34560	0.86	+0.2
3,625,446	+		PGA1_c34560	0.86	-0.9
3,625,446	+		PGA1_c34560	0.86	-1.6
3,625,446	+		PGA1_c34560	0.86	+0.3
3,625,446	+		PGA1_c34560	0.86	+0.4
3,625,446	+		PGA1_c34560	0.86	+0.8
3,625,454	-		PGA1_c34560	0.86	+0.0
3,625,454	-		PGA1_c34560	0.86	-0.4
3,625,454	-		PGA1_c34560	0.86	-0.7
3,625,454	-		PGA1_c34560	0.86	+0.2
3,625,454	-		PGA1_c34560	0.86	+0.2
3,625,454	-		PGA1_c34560	0.86	+0.4
3,625,454	-		PGA1_c34560	0.86	-0.7
3,625,454	-		PGA1_c34560	0.86	-0.1
3,625,454	-		PGA1_c34560	0.86	+0.0
3,625,454	-		PGA1_c34560	0.86	+0.5
3,625,454	-		PGA1_c34560	0.86	-0.8
3,625,454	-		PGA1_c34560	0.86	+0.7
3,625,456	+		PGA1_c34560	0.86	+2.3
3,625,471	+		PGA1_c34560	0.87	-0.6
3,625,476	+		PGA1_c34560	0.88	+0.8
3,625,476	+		PGA1_c34560	0.88	-0.8
3,625,476	+		PGA1_c34560	0.88	+0.8
3,625,476	+		PGA1_c34560	0.88	-0.2
3,625,479	-		PGA1_c34560	0.88	+0.3
3,625,484	-		PGA1_c34560	0.88	-0.6
3,625,484	-		PGA1_c34560	0.88	-1.5
3,625,505	+		PGA1_c34560	0.89	-0.1
3,625,558	+				-1.2
3,625,558	+				-0.5
3,625,566	-				+0.4
3,625,566	-				-0.6
3,625,566	-				-1.1
3,625,597	-				-0.5
3,625,597	-				+0.2
3,625,615	+				+1.0
3,625,635	+				+0.2
3,625,635	-				-0.0
3,625,640	+				-1.7
3,625,640	+				-1.0
3,625,640	+				-1.1
3,625,640	+				+0.8
3,625,648	-				-0.9
3,625,665	-				+0.3
3,625,757	+				+2.3
3,625,765	-				-0.2
3,625,765	-				-0.8
3,625,782	+				+1.0
3,625,782	+				-1.0
3,625,782	+				-0.4
3,625,782	+				+1.2
3,625,782	+				+0.8
3,625,782	+				+0.7
3,625,790	-		PGA1_c34570	0.10	-0.5
3,625,790	-		PGA1_c34570	0.10	+0.8
3,625,790	-		PGA1_c34570	0.10	+1.5
3,625,790	-		PGA1_c34570	0.10	+0.0
3,625,790	-		PGA1_c34570	0.10	+0.4
3,625,790	-		PGA1_c34570	0.10	+0.3
3,625,790	-		PGA1_c34570	0.10	-0.9
3,625,790	-		PGA1_c34570	0.10	+2.8
3,625,820	-		PGA1_c34570	0.14	+0.5
3,625,886	-		PGA1_c34570	0.21	+0.3
3,625,891	+		PGA1_c34570	0.21	-1.2
3,625,891	+		PGA1_c34570	0.21	-0.4
3,625,891	+		PGA1_c34570	0.21	+0.8
3,625,891	+		PGA1_c34570	0.21	+1.0
3,625,899	-		PGA1_c34570	0.22	+0.4
3,625,899	-		PGA1_c34570	0.22	+0.3
3,625,909	-		PGA1_c34570	0.23	+0.1
3,625,919	+		PGA1_c34570	0.24	+0.4
3,625,919	+		PGA1_c34570	0.24	+1.0
3,625,919	+		PGA1_c34570	0.24	-0.0
3,625,919	+		PGA1_c34570	0.24	-0.6
3,625,927	-		PGA1_c34570	0.25	+2.2
3,625,927	-		PGA1_c34570	0.25	-0.6
3,625,927	-		PGA1_c34570	0.25	+1.4
3,625,927	-		PGA1_c34570	0.25	+1.0
3,625,927	-		PGA1_c34570	0.25	+0.2
3,625,927	-		PGA1_c34570	0.25	+1.1
3,625,927	-		PGA1_c34570	0.25	-0.7
3,625,927	-		PGA1_c34570	0.25	+1.8
3,625,966	+		PGA1_c34570	0.30	-1.7
3,625,974	-		PGA1_c34570	0.30	+1.2
3,626,006	+		PGA1_c34570	0.34	-0.0
3,626,008	-		PGA1_c34570	0.34	+0.9
3,626,014	-		PGA1_c34570	0.35	-0.3
3,626,026	+		PGA1_c34570	0.36	+0.8
3,626,026	+		PGA1_c34570	0.36	-0.9
3,626,026	+		PGA1_c34570	0.36	+1.8
3,626,026	+		PGA1_c34570	0.36	+1.3
3,626,026	+		PGA1_c34570	0.36	-0.8
3,626,026	+		PGA1_c34570	0.36	-0.4
3,626,026	+		PGA1_c34570	0.36	-0.1
3,626,026	+		PGA1_c34570	0.36	-0.2
3,626,026	+		PGA1_c34570	0.36	-0.8
3,626,026	+		PGA1_c34570	0.36	+0.5
3,626,026	+		PGA1_c34570	0.36	+1.1
3,626,026	+		PGA1_c34570	0.36	+0.9
3,626,026	+		PGA1_c34570	0.36	-0.8
3,626,026	+		PGA1_c34570	0.36	-1.4
3,626,026	+		PGA1_c34570	0.36	-1.2
3,626,026	+		PGA1_c34570	0.36	+1.3
3,626,026	+		PGA1_c34570	0.36	-0.4
3,626,034	-		PGA1_c34570	0.37	+0.3
3,626,034	-		PGA1_c34570	0.37	+2.2
3,626,034	-		PGA1_c34570	0.37	+1.0
3,626,034	-		PGA1_c34570	0.37	-0.2
3,626,034	-		PGA1_c34570	0.37	+1.2
3,626,034	-		PGA1_c34570	0.37	+0.4
3,626,034	-		PGA1_c34570	0.37	+0.8
3,626,034	-		PGA1_c34570	0.37	+0.9
3,626,066	-		PGA1_c34570	0.40	+0.2
3,626,086	-		PGA1_c34570	0.43	+0.3
3,626,182	+		PGA1_c34570	0.53	-2.0
3,626,182	+		PGA1_c34570	0.53	-1.2
3,626,182	+		PGA1_c34570	0.53	+2.6
3,626,182	+		PGA1_c34570	0.53	-0.6
3,626,190	-		PGA1_c34570	0.54	+1.3
3,626,190	-		PGA1_c34570	0.54	+0.2
3,626,190	-		PGA1_c34570	0.54	+0.2
3,626,194	+		PGA1_c34570	0.54	+1.8
3,626,284	-		PGA1_c34570	0.64	+1.6
3,626,305	+		PGA1_c34570	0.66	-2.9
3,626,351	-		PGA1_c34570	0.71	+0.0
3,626,421	+		PGA1_c34570	0.79	+0.8
3,626,450	+		PGA1_c34570	0.82	-0.2
3,626,511	+		PGA1_c34570	0.89	+1.2
3,626,518	+		PGA1_c34570	0.89	+1.0
3,626,573	-				+1.8
3,626,590	+				+1.6
3,626,590	+				+1.4
3,626,590	+				+0.1
3,626,590	+				-2.1
3,626,590	+				+0.7
3,626,590	+				-0.6
3,626,590	+				+0.2
3,626,590	+				-1.6
3,626,590	+				-0.5
3,626,590	+				-1.0
3,626,590	+				+0.4
3,626,590	+				+1.7
3,626,590	+				+1.8
3,626,590	+				-0.1
3,626,590	+				+0.4
3,626,590	+				+0.3
3,626,590	+				-1.0
3,626,590	+				+2.1
3,626,590	+				-1.4
3,626,590	+				+1.8
3,626,590	+				+1.4
3,626,590	+				-0.1
3,626,590	+				+0.6
3,626,590	+				-1.4
3,626,590	+				-1.8
3,626,590	+				+0.8
3,626,590	+				+0.8
3,626,590	+				+0.8
3,626,590	+				+1.0
3,626,590	+				+1.3
3,626,598	-				+0.4
3,626,598	-				-1.8
3,626,598	-				-1.0
3,626,598	-				-0.3
3,626,598	-				+0.3
3,626,598	-				+1.1
3,626,598	-				+1.4
3,626,598	-				+1.2
3,626,598	-				-0.6
3,626,598	-				+0.2
3,626,598	-				-0.1
3,626,598	-				+1.5
3,626,598	-				+0.0
3,626,598	-				-0.2
3,626,598	-				-1.0
3,626,598	-				+0.2
3,626,598	-				-0.2
3,626,598	-				-0.2
3,626,598	-				+1.5
3,626,646	-				-0.2
3,626,678	-				-1.2
3,626,743	+				+0.2
3,626,762	+				+0.2
3,626,770	-				+0.8
3,626,770	-				-1.2
3,626,770	-				-0.2