Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25610

Experiment: DinoMM minimal media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DinoMM minimal media
2,666,782	+		PGA1_c25590	0.60	-0.6
2,666,797	+		PGA1_c25590	0.61	+0.4
2,666,805	-		PGA1_c25590	0.62	+0.2
2,666,805	-		PGA1_c25590	0.62	-1.2
2,666,805	-		PGA1_c25590	0.62	-1.2
2,666,807	+		PGA1_c25590	0.62	+0.9
2,666,828	-		PGA1_c25590	0.64	-0.4
2,666,828	-		PGA1_c25590	0.64	+0.6
2,666,828	-		PGA1_c25590	0.64	-0.9
2,666,872	+		PGA1_c25590	0.69	+2.4
2,666,900	+		PGA1_c25590	0.71	+0.6
2,666,908	-		PGA1_c25590	0.72	+0.0
2,666,917	-		PGA1_c25590	0.73	-1.7
2,666,972	+		PGA1_c25590	0.78	+0.7
2,667,016	-		PGA1_c25590	0.82	+0.3
2,667,051	-		PGA1_c25590	0.86	+0.9
2,667,056	-		PGA1_c25590	0.86	+1.8
2,667,089	+		PGA1_c25590	0.89	-1.0
2,667,097	-				-0.4
2,667,108	+				-1.1
2,667,108	+				-0.4
2,667,108	+				+0.6
2,667,116	-				-1.2
2,667,116	-				+1.1
2,667,116	-				+1.6
2,667,118	+				-0.3
2,667,172	-				+1.2
2,667,172	-				+0.5
2,667,220	-				-1.6
2,667,220	-				+0.0
2,667,248	+				-0.1
2,667,256	-				+0.2
2,667,256	-				-0.6
2,667,307	-				+1.0
2,667,313	-				+1.0
2,667,345	+				+0.0
2,667,391	-				-1.6
2,667,418	+				+1.0
2,667,418	+				+0.3
2,667,418	+				+0.2
2,667,418	+				+0.9
2,667,418	+				+1.0
2,667,418	+				-0.3
2,667,418	+				+1.0
2,667,418	+				-1.8
2,667,418	+				+0.6
2,667,418	+				-1.1
2,667,422	-				-1.2
2,667,424	+				+1.9
2,667,426	-				+0.6
2,667,426	-				-0.1
2,667,426	-				-1.0
2,667,426	-				-0.2
2,667,426	-				+0.1
2,667,426	-				+0.4
2,667,426	-				+1.4
2,667,426	-				-3.3
2,667,426	-				-0.4
2,667,426	-				-0.1
2,667,426	-				-0.7
2,667,426	-				+0.8
2,667,462	+				+1.2
2,667,470	-				+1.2
2,667,475	-				+0.1
2,667,482	-				-0.4
2,667,486	+				+0.9
2,667,496	+				-0.6
2,667,499	-				+0.6
2,667,504	+				+0.2
2,667,504	-				+0.5
2,667,529	+				+0.6
2,667,540	+				-0.5
2,667,548	-				-0.6
2,667,587	+				+1.2
2,667,589	-				+0.6
2,667,595	+				-1.4
2,667,595	+				-0.0
2,667,595	+				-1.0
2,667,595	+				+0.4
2,667,595	+				+0.0
2,667,595	+				-2.0
2,667,595	+				-0.5
2,667,603	-				+0.4
2,667,603	-				+0.4
2,667,603	-				+0.6
2,667,632	+				-0.6
2,667,641	+				+1.9
2,667,702	+				+1.1
2,667,702	+				+1.0
2,667,702	+				+0.9
2,667,709	+				-0.5
2,667,710	-				-0.0
2,667,712	+				-0.7
2,667,740	+				-1.0
2,667,740	+				-1.0
2,667,740	+				+0.3
2,667,740	+				+1.6
2,667,740	+				-1.2
2,667,740	+				-0.2
2,667,740	+				-0.7
2,667,740	+				-1.2
2,667,740	+				+1.4
2,667,748	-				+1.0
2,667,748	-				-0.6
2,667,748	-				-0.3
2,667,752	+				-2.0
2,667,752	+				-1.4
2,667,752	+				-0.7
2,667,752	+				-0.2
2,667,752	+				+0.9
2,667,760	-				-1.1
2,667,766	-				-0.8
2,667,768	-				-0.3
2,667,768	-				+0.3
2,667,768	-				-1.0
2,667,770	+				-0.0
2,667,770	+				+0.9
2,667,770	+				-0.3
2,667,770	+				+0.6
2,667,770	+				-1.1
2,667,777	-				+1.6
2,667,778	-				-0.4
2,667,778	-				-0.8
2,667,778	-				-1.0
2,667,778	-				-0.6
2,667,778	-				-0.4
2,667,778	-				+0.4
2,667,778	-				-0.7
2,667,778	-				+0.2
2,667,778	-				-0.7
2,667,778	-				-0.1
2,667,812	-				+0.6
2,667,858	+		PGA1_c25610	0.18	-1.7
2,667,866	-		PGA1_c25610	0.19	+0.3
2,667,866	-		PGA1_c25610	0.19	-0.4
2,667,876	+		PGA1_c25610	0.21	-0.8
2,667,902	-		PGA1_c25610	0.25	-0.5
2,667,955	-		PGA1_c25610	0.35	-0.6
2,667,964	+		PGA1_c25610	0.36	-1.4
2,667,970	+		PGA1_c25610	0.37	-1.0
2,667,981	+		PGA1_c25610	0.39	-1.2
2,667,981	+		PGA1_c25610	0.39	+0.0
2,667,993	+		PGA1_c25610	0.41	+0.2
2,667,993	+		PGA1_c25610	0.41	-1.4
2,668,015	-		PGA1_c25610	0.45	-0.2
2,668,015	-		PGA1_c25610	0.45	+2.0
2,668,030	+		PGA1_c25610	0.48	+1.6
2,668,062	+		PGA1_c25610	0.54	-1.6
2,668,082	-		PGA1_c25610	0.57	-0.7
2,668,161	-		PGA1_c25610	0.71	-0.5
2,668,161	-		PGA1_c25610	0.71	-1.2
2,668,170	+		PGA1_c25610	0.73	+0.0
2,668,180	+		PGA1_c25610	0.74	+0.0
2,668,192	+		PGA1_c25610	0.77	-0.6
2,668,200	-		PGA1_c25610	0.78	-0.5
2,668,273	-				-0.1
2,668,333	+				+0.3
2,668,338	+				+0.6
2,668,341	-				+1.3
2,668,341	-				-0.7
2,668,398	+		PGA1_c25620	0.17	-0.5
2,668,413	+		PGA1_c25620	0.21	-0.5
2,668,423	-		PGA1_c25620	0.23	+0.1
2,668,457	+		PGA1_c25620	0.30	+0.6
2,668,489	+		PGA1_c25620	0.38	+0.1
2,668,519	-		PGA1_c25620	0.44	-0.7
2,668,563	+		PGA1_c25620	0.54	-1.6
2,668,563	+		PGA1_c25620	0.54	+0.3
2,668,571	-		PGA1_c25620	0.56	-0.8
2,668,576	+		PGA1_c25620	0.57	-0.1
2,668,589	+		PGA1_c25620	0.60	+1.4
2,668,597	-		PGA1_c25620	0.62	+1.0
2,668,597	-		PGA1_c25620	0.62	-1.8
2,668,597	-		PGA1_c25620	0.62	-0.1
2,668,622	+		PGA1_c25620	0.67	-1.2
2,668,665	-		PGA1_c25620	0.77	-0.6
2,668,692	+		PGA1_c25620	0.83	+0.0
2,668,694	+		PGA1_c25620	0.83	-0.5
2,668,700	-		PGA1_c25620	0.85	-0.7
2,668,700	-		PGA1_c25620	0.85	+0.5
2,668,700	-		PGA1_c25620	0.85	-0.7
2,668,739	+				-0.7
2,668,784	+				+1.1
2,668,784	+				+1.1
2,668,784	+				-0.4
2,668,784	+				+0.5
2,668,784	+				+0.1
2,668,792	-				-0.3
2,668,792	-				-0.7
2,668,792	-				-0.2
2,668,792	-				-0.7
2,668,792	-				+0.8
2,668,792	-				-0.7
2,668,792	-				-0.1
2,668,828	+				+0.3
2,668,878	-				+2.2
2,668,880	+				+1.0
2,669,018	+		PGA1_c25630	0.24	-0.8
2,669,020	+		PGA1_c25630	0.25	+0.2
2,669,028	-		PGA1_c25630	0.29	-0.9
2,669,028	-		PGA1_c25630	0.29	+0.4
2,669,090	+		PGA1_c25630	0.58	-0.4
2,669,090	+		PGA1_c25630	0.58	-0.5
2,669,090	+		PGA1_c25630	0.58	+0.0
2,669,098	-		PGA1_c25630	0.62	+1.0
2,669,105	+		PGA1_c25630	0.65	+1.0
2,669,232	-				-1.9
2,669,242	-				-0.1
2,669,260	+				+1.0
2,669,310	-				-1.2