Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17985

Experiment: adipate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	adipate (C)
3,889,981	-		RR42_RS17980	0.55	-0.0
3,890,082	+		RR42_RS17980	0.60	-0.1
3,890,082	+		RR42_RS17980	0.60	-0.6
3,890,082	+		RR42_RS17980	0.60	-1.2
3,890,082	+		RR42_RS17980	0.60	-0.7
3,890,083	-		RR42_RS17980	0.60	-0.4
3,890,083	-		RR42_RS17980	0.60	-1.7
3,890,120	+		RR42_RS17980	0.63	-0.3
3,890,120	+		RR42_RS17980	0.63	+0.5
3,890,120	+		RR42_RS17980	0.63	+0.2
3,890,120	+		RR42_RS17980	0.63	-1.5
3,890,120	+		RR42_RS17980	0.63	-0.8
3,890,121	-		RR42_RS17980	0.63	-0.4
3,890,121	-		RR42_RS17980	0.63	+0.5
3,890,121	-		RR42_RS17980	0.63	-0.8
3,890,121	-		RR42_RS17980	0.63	-1.1
3,890,396	+		RR42_RS17980	0.78	-1.0
3,890,397	-		RR42_RS17980	0.78	-1.3
3,890,538	+		RR42_RS17980	0.86	+0.8
3,890,538	+		RR42_RS17980	0.86	+0.5
3,890,539	-		RR42_RS17980	0.86	-2.3
3,890,598	+		RR42_RS17980	0.90	-0.3
3,890,598	+		RR42_RS17980	0.90	-0.5
3,890,599	-		RR42_RS17980	0.90	-0.6
3,890,599	-		RR42_RS17980	0.90	+0.2
3,890,682	-				-0.1
3,890,682	-				-0.2
3,890,696	-				+0.6
3,890,696	-				-0.8
3,890,696	-				-0.2
3,890,771	+				-0.4
3,890,771	+				+0.8
3,890,771	+				+2.5
3,890,771	+				-0.3
3,890,771	+				-0.8
3,890,772	-				-0.5
3,890,772	-				-1.1
3,890,772	-				-1.4
3,890,772	-				-0.5
3,890,775	+				+1.0
3,890,775	+				+2.1
3,890,776	-				+0.6
3,890,776	-				-1.6
3,890,776	-				-1.7
3,891,063	+		RR42_RS17985	0.20	-1.4
3,891,063	+		RR42_RS17985	0.20	-1.3
3,891,063	+		RR42_RS17985	0.20	-1.7
3,891,063	+		RR42_RS17985	0.20	+1.5
3,891,063	+		RR42_RS17985	0.20	-1.9
3,891,064	-		RR42_RS17985	0.20	-0.8
3,891,064	-		RR42_RS17985	0.20	-1.7
3,891,252	+		RR42_RS17985	0.35	-1.4
3,891,252	+		RR42_RS17985	0.35	-2.2
3,891,252	+		RR42_RS17985	0.35	-1.4
3,891,253	-		RR42_RS17985	0.35	-1.2
3,891,253	-		RR42_RS17985	0.35	-0.3
3,891,321	+		RR42_RS17985	0.41	+2.9
3,891,321	+		RR42_RS17985	0.41	+1.1
3,891,321	+		RR42_RS17985	0.41	+0.9
3,891,321	+		RR42_RS17985	0.41	+1.1
3,891,321	+		RR42_RS17985	0.41	-0.5
3,891,322	-		RR42_RS17985	0.41	-0.2
3,891,322	-		RR42_RS17985	0.41	-1.5
3,891,322	-		RR42_RS17985	0.41	+0.2
3,891,323	+		RR42_RS17985	0.41	+1.4
3,891,323	+		RR42_RS17985	0.41	+1.7
3,891,324	-		RR42_RS17985	0.41	+0.4
3,891,373	-		RR42_RS17985	0.45	-0.5
3,891,493	+		RR42_RS17985	0.54	-0.6
3,891,494	-		RR42_RS17985	0.54	-1.9
3,891,494	-		RR42_RS17985	0.54	+1.3
3,891,531	+		RR42_RS17985	0.57	-1.8
3,891,570	+		RR42_RS17985	0.60	-2.3
3,891,570	+		RR42_RS17985	0.60	-0.7
3,891,570	+		RR42_RS17985	0.60	+0.1
3,891,571	-		RR42_RS17985	0.60	+0.8
3,891,571	-		RR42_RS17985	0.60	+2.8
3,891,571	-		RR42_RS17985	0.60	-2.4
3,891,574	+		RR42_RS17985	0.61	-0.2
3,891,574	+		RR42_RS17985	0.61	+1.1
3,891,574	+		RR42_RS17985	0.61	-2.6
3,891,574	+		RR42_RS17985	0.61	-0.5
3,891,574	+		RR42_RS17985	0.61	+0.7
3,891,574	+		RR42_RS17985	0.61	-1.8
3,891,574	+		RR42_RS17985	0.61	-1.4
3,891,574	+		RR42_RS17985	0.61	-1.3
3,891,574	+		RR42_RS17985	0.61	-1.1
3,891,575	-		RR42_RS17985	0.61	-1.3
3,891,575	-		RR42_RS17985	0.61	-0.6
3,891,575	-		RR42_RS17985	0.61	-0.7
3,891,575	-		RR42_RS17985	0.61	-1.1
3,891,583	+		RR42_RS17985	0.61	+0.0
3,891,768	+		RR42_RS17985	0.76	-2.7
3,891,768	+		RR42_RS17985	0.76	-0.6
3,891,769	-		RR42_RS17985	0.76	-1.5
3,891,769	-		RR42_RS17985	0.76	-1.7
3,891,769	-		RR42_RS17985	0.76	+0.2
3,891,771	+		RR42_RS17985	0.76	+0.1
3,891,771	+		RR42_RS17985	0.76	-0.4
3,891,772	-		RR42_RS17985	0.76	+1.1
3,891,772	-		RR42_RS17985	0.76	-0.6
3,891,803	-		RR42_RS17985	0.79	-0.6
3,891,854	+		RR42_RS17985	0.83	-2.1
3,891,905	+		RR42_RS17985	0.87	-0.7
3,891,905	+		RR42_RS17985	0.87	-0.0
3,891,933	+		RR42_RS17985	0.89	-2.5
3,891,934	-		RR42_RS17985	0.89	-0.9
3,891,934	-		RR42_RS17985	0.89	+0.0
3,891,934	-		RR42_RS17985	0.89	-0.8
3,892,038	+				-1.2
3,892,038	+				-0.6
3,892,038	+				-2.6
3,892,038	+				-1.8
3,892,038	+				-1.2
3,892,039	-				-2.7
3,892,071	+				-0.8
3,892,071	+				+0.8
3,892,071	+				-0.8
3,892,072	-				-1.2
3,892,072	-				-0.2
3,892,072	-				-1.3
3,892,275	+		RR42_RS17990	0.18	-0.2
3,892,275	+		RR42_RS17990	0.18	-1.3
3,892,275	+		RR42_RS17990	0.18	+0.2
3,892,275	+		RR42_RS17990	0.18	-1.3
3,892,275	+		RR42_RS17990	0.18	-0.8
3,892,275	+		RR42_RS17990	0.18	-1.2
3,892,276	-		RR42_RS17990	0.18	-0.3
3,892,321	-		RR42_RS17990	0.23	+0.1
3,892,401	+		RR42_RS17990	0.32	-1.7
3,892,402	-		RR42_RS17990	0.32	-2.4
3,892,402	-		RR42_RS17990	0.32	-1.0
3,892,402	-		RR42_RS17990	0.32	+0.2
3,892,595	-		RR42_RS17990	0.54	+0.4
3,892,624	+		RR42_RS17990	0.58	-0.5
3,892,625	-		RR42_RS17990	0.58	-2.7
3,892,625	-		RR42_RS17990	0.58	-2.7
3,892,625	-		RR42_RS17990	0.58	-0.9
3,892,722	+		RR42_RS17990	0.69	+0.5
3,892,723	-		RR42_RS17990	0.69	-0.7
3,892,765	-		RR42_RS17990	0.74	-0.7
3,892,923	+				-3.6
3,892,923	+				-2.4
3,892,923	+				-0.4
3,892,923	+				-0.8
3,892,923	+				-1.6
3,892,923	+				-1.9
3,892,924	-				+1.3
3,892,924	-				+1.7
3,892,924	-				+0.8
3,892,925	+				-1.9
3,892,925	+				-3.3
3,892,926	-				+1.8
3,892,926	-				+0.6
3,892,926	-				-1.9
3,893,052	+				+0.1
3,893,052	+				+0.6
3,893,052	+				+0.0
3,893,052	+				-0.2
3,893,052	+				-1.4