Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26110

Experiment: DinoMM minimal media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DinoMM minimal media
2,715,362	+		PGA1_c26100	0.27	-0.9
2,715,370	+		PGA1_c26100	0.28	-0.2
2,715,370	+		PGA1_c26100	0.28	-0.4
2,715,378	+		PGA1_c26100	0.29	-1.2
2,715,378	+		PGA1_c26100	0.29	+0.2
2,715,378	+		PGA1_c26100	0.29	+0.2
2,715,386	-		PGA1_c26100	0.30	+0.0
2,715,428	+		PGA1_c26100	0.34	-0.6
2,715,428	+		PGA1_c26100	0.34	-0.1
2,715,428	+		PGA1_c26100	0.34	-0.6
2,715,428	+		PGA1_c26100	0.34	-0.2
2,715,428	+		PGA1_c26100	0.34	+0.0
2,715,428	+		PGA1_c26100	0.34	-0.2
2,715,428	+		PGA1_c26100	0.34	-2.0
2,715,428	+		PGA1_c26100	0.34	+0.7
2,715,428	+		PGA1_c26100	0.34	+1.4
2,715,428	+		PGA1_c26100	0.34	-0.6
2,715,428	+		PGA1_c26100	0.34	-0.8
2,715,428	+		PGA1_c26100	0.34	-0.0
2,715,428	+		PGA1_c26100	0.34	-0.4
2,715,436	-		PGA1_c26100	0.35	-0.8
2,715,436	-		PGA1_c26100	0.35	+0.8
2,715,436	-		PGA1_c26100	0.35	+0.1
2,715,436	-		PGA1_c26100	0.35	-0.1
2,715,436	-		PGA1_c26100	0.35	+0.9
2,715,436	-		PGA1_c26100	0.35	+0.2
2,715,436	-		PGA1_c26100	0.35	+0.3
2,715,436	-		PGA1_c26100	0.35	-1.2
2,715,436	-		PGA1_c26100	0.35	-0.7
2,715,436	-		PGA1_c26100	0.35	-0.2
2,715,436	-		PGA1_c26100	0.35	-1.0
2,715,436	-		PGA1_c26100	0.35	+0.4
2,715,436	-		PGA1_c26100	0.35	+0.8
2,715,436	-		PGA1_c26100	0.35	-0.7
2,715,476	+		PGA1_c26100	0.39	-0.1
2,715,478	+		PGA1_c26100	0.39	-1.2
2,715,486	-		PGA1_c26100	0.40	+0.0
2,715,493	+		PGA1_c26100	0.40	+0.6
2,715,550	+		PGA1_c26100	0.46	+0.8
2,715,558	-		PGA1_c26100	0.47	-1.2
2,715,573	+		PGA1_c26100	0.49	+0.0
2,715,618	-		PGA1_c26100	0.53	+0.5
2,715,649	+		PGA1_c26100	0.56	-2.0
2,715,656	+		PGA1_c26100	0.57	+0.0
2,715,656	+		PGA1_c26100	0.57	+0.1
2,715,676	+		PGA1_c26100	0.59	+1.7
2,715,684	-		PGA1_c26100	0.60	-0.4
2,715,690	+		PGA1_c26100	0.61	-0.9
2,715,727	+		PGA1_c26100	0.64	+0.8
2,715,731	+		PGA1_c26100	0.65	+0.8
2,715,735	-		PGA1_c26100	0.65	-0.5
2,715,754	-		PGA1_c26100	0.67	+0.4
2,715,770	+		PGA1_c26100	0.69	+1.1
2,715,800	+		PGA1_c26100	0.72	+0.0
2,715,822	-		PGA1_c26100	0.74	-0.4
2,715,824	+		PGA1_c26100	0.74	+0.3
2,715,824	+		PGA1_c26100	0.74	+0.4
2,715,824	+		PGA1_c26100	0.74	+0.4
2,715,824	+		PGA1_c26100	0.74	+0.0
2,715,832	-		PGA1_c26100	0.75	+0.6
2,715,832	-		PGA1_c26100	0.75	-0.6
2,715,832	-		PGA1_c26100	0.75	+1.4
2,715,832	-		PGA1_c26100	0.75	-0.9
2,715,851	-		PGA1_c26100	0.77	+0.2
2,715,876	+		PGA1_c26100	0.80	-0.7
2,715,879	-		PGA1_c26100	0.80	-0.0
2,715,881	+		PGA1_c26100	0.80	-0.7
2,715,893	+		PGA1_c26100	0.81	+0.4
2,715,893	+		PGA1_c26100	0.81	+0.1
2,715,901	-		PGA1_c26100	0.82	-0.6
2,715,901	-		PGA1_c26100	0.82	+1.4
2,715,923	-		PGA1_c26100	0.84	+1.4
2,715,928	+		PGA1_c26100	0.85	+0.4
2,716,034	-				+0.4
2,716,034	-				+0.1
2,716,066	+				-0.6
2,716,097	+				+0.0
2,716,159	-				+1.1
2,716,212	-				+0.5
2,716,222	+				-1.6
2,716,225	-				-1.3
2,716,299	+				-1.2
2,716,386	+		PGA1_c26110	0.29	-2.0
2,716,386	+		PGA1_c26110	0.29	+0.7
2,716,386	+		PGA1_c26110	0.29	+0.7
2,716,386	+		PGA1_c26110	0.29	-1.7
2,716,394	-		PGA1_c26110	0.31	+0.8
2,716,394	-		PGA1_c26110	0.31	+0.1
2,716,394	-		PGA1_c26110	0.31	+1.1
2,716,394	-		PGA1_c26110	0.31	-0.3
2,716,396	+		PGA1_c26110	0.32	+0.9
2,716,396	+		PGA1_c26110	0.32	+1.1
2,716,396	+		PGA1_c26110	0.32	-0.7
2,716,396	+		PGA1_c26110	0.32	+0.1
2,716,396	+		PGA1_c26110	0.32	-2.6
2,716,396	+		PGA1_c26110	0.32	-0.2
2,716,396	+		PGA1_c26110	0.32	-1.1
2,716,396	+		PGA1_c26110	0.32	-1.2
2,716,396	+		PGA1_c26110	0.32	-1.9
2,716,396	+		PGA1_c26110	0.32	+0.2
2,716,396	+		PGA1_c26110	0.32	+1.4
2,716,396	+		PGA1_c26110	0.32	-0.4
2,716,396	+		PGA1_c26110	0.32	+0.9
2,716,396	+		PGA1_c26110	0.32	+0.8
2,716,396	+		PGA1_c26110	0.32	-0.7
2,716,396	+		PGA1_c26110	0.32	+1.4
2,716,396	+		PGA1_c26110	0.32	-1.0
2,716,396	+		PGA1_c26110	0.32	-1.4
2,716,396	+		PGA1_c26110	0.32	+0.1
2,716,396	+		PGA1_c26110	0.32	+2.4
2,716,396	+		PGA1_c26110	0.32	+1.0
2,716,396	+		PGA1_c26110	0.32	+0.8
2,716,396	+		PGA1_c26110	0.32	-0.6
2,716,396	-		PGA1_c26110	0.32	-1.4
2,716,404	-		PGA1_c26110	0.35	+0.2
2,716,404	-		PGA1_c26110	0.35	+0.7
2,716,404	-		PGA1_c26110	0.35	+0.9
2,716,404	-		PGA1_c26110	0.35	+1.0
2,716,419	+		PGA1_c26110	0.39	+0.4
2,716,460	+		PGA1_c26110	0.52	-0.7
2,716,467	-		PGA1_c26110	0.54	+0.7
2,716,532	+		PGA1_c26110	0.74	-0.4
2,716,540	-		PGA1_c26110	0.77	+2.0
2,716,540	-		PGA1_c26110	0.77	+0.4
2,716,540	-		PGA1_c26110	0.77	+1.7
2,716,545	-		PGA1_c26110	0.78	+0.1
2,716,587	+				+2.4
2,716,595	-				-1.7
2,716,595	-				+0.6
2,716,622	+				-0.3
2,716,630	+				+0.1
2,716,661	+				+0.0
2,716,669	-				-1.4
2,716,747	+				+0.7
2,716,800	+				+0.8
2,716,813	-				-0.1
2,716,869	+				+0.6
2,716,893	+				+1.5
2,716,893	+				+0.4
2,716,901	-				+0.8
2,716,958	+		PGA1_c26120	0.13	-0.6
2,717,001	-		PGA1_c26120	0.15	-1.2
2,717,001	-		PGA1_c26120	0.15	+0.1
2,717,026	-		PGA1_c26120	0.17	+0.5
2,717,188	-		PGA1_c26120	0.28	-1.3
2,717,246	-		PGA1_c26120	0.31	+1.0
2,717,260	+		PGA1_c26120	0.32	-1.2
2,717,260	+		PGA1_c26120	0.32	+1.8
2,717,268	-		PGA1_c26120	0.33	+0.7
2,717,268	-		PGA1_c26120	0.33	-0.1
2,717,283	+		PGA1_c26120	0.34	+1.6
2,717,288	+		PGA1_c26120	0.34	-0.2
2,717,323	-		PGA1_c26120	0.36	-0.6
2,717,341	-		PGA1_c26120	0.38	+0.3
2,717,362	+		PGA1_c26120	0.39	-0.3
2,717,370	-		PGA1_c26120	0.39	-0.5
2,717,434	-		PGA1_c26120	0.44	+0.4
2,717,438	-		PGA1_c26120	0.44	+0.8
2,717,486	-		PGA1_c26120	0.47	-0.2
2,717,486	-		PGA1_c26120	0.47	-1.2
2,717,486	-		PGA1_c26120	0.47	-0.4
2,717,493	+		PGA1_c26120	0.47	-0.7
2,717,515	+		PGA1_c26120	0.49	-0.2
2,717,557	-		PGA1_c26120	0.52	-0.9
2,717,557	-		PGA1_c26120	0.52	+2.0