Experiment: Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05252 and H281DRAFT_05253 are separated by 0 nucleotides H281DRAFT_05253 and H281DRAFT_05254 overlap by 17 nucleotides H281DRAFT_05254 and H281DRAFT_05256 are separated by 176 nucleotides
H281DRAFT_05252: H281DRAFT_05252 - amino acid adenylation domain-containing protein, at 221,164 to 222,837
_05252
H281DRAFT_05253: H281DRAFT_05253 - Acyl carrier protein, at 222,838 to 223,098
_05253
H281DRAFT_05254: H281DRAFT_05254 - Lysophospholipase, at 223,082 to 224,998
_05254
H281DRAFT_05256: H281DRAFT_05256 - threonine ammonia-lyase, biosynthetic, long form, at 225,175 to 226,197
_05256
Position (kb) 223
224
225 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 222.103 kb on - strand, within H281DRAFT_05252 at 222.386 kb on - strand, within H281DRAFT_05252 at 222.768 kb on - strand at 222.921 kb on - strand, within H281DRAFT_05253 at 222.923 kb on - strand, within H281DRAFT_05253 at 223.516 kb on - strand, within H281DRAFT_05254 at 223.548 kb on - strand, within H281DRAFT_05254 at 223.551 kb on + strand, within H281DRAFT_05254 at 223.551 kb on + strand, within H281DRAFT_05254 at 223.576 kb on + strand, within H281DRAFT_05254 at 223.577 kb on - strand, within H281DRAFT_05254 at 223.821 kb on - strand, within H281DRAFT_05254 at 223.866 kb on - strand, within H281DRAFT_05254 at 223.870 kb on + strand, within H281DRAFT_05254 at 224.366 kb on + strand, within H281DRAFT_05254 at 224.366 kb on + strand, within H281DRAFT_05254 at 224.366 kb on + strand, within H281DRAFT_05254 at 224.366 kb on + strand, within H281DRAFT_05254 at 224.366 kb on + strand, within H281DRAFT_05254 at 224.367 kb on - strand, within H281DRAFT_05254 at 224.367 kb on - strand, within H281DRAFT_05254 at 224.718 kb on - strand, within H281DRAFT_05254 at 225.092 kb on + strand at 225.093 kb on - strand at 225.095 kb on + strand at 225.096 kb on - strand at 225.672 kb on + strand, within H281DRAFT_05256
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days remove 222,103 - H281DRAFT_05252 0.56 +0.6 222,386 - H281DRAFT_05252 0.73 -1.7 222,768 - -0.1 222,921 - H281DRAFT_05253 0.32 -1.1 222,923 - H281DRAFT_05253 0.33 -0.0 223,516 - H281DRAFT_05254 0.23 +0.6 223,548 - H281DRAFT_05254 0.24 -0.7 223,551 + H281DRAFT_05254 0.24 -2.9 223,551 + H281DRAFT_05254 0.24 -0.7 223,576 + H281DRAFT_05254 0.26 +0.4 223,577 - H281DRAFT_05254 0.26 +0.4 223,821 - H281DRAFT_05254 0.39 +1.2 223,866 - H281DRAFT_05254 0.41 +0.1 223,870 + H281DRAFT_05254 0.41 +0.9 224,366 + H281DRAFT_05254 0.67 +2.6 224,366 + H281DRAFT_05254 0.67 +0.1 224,366 + H281DRAFT_05254 0.67 +0.0 224,366 + H281DRAFT_05254 0.67 -0.6 224,366 + H281DRAFT_05254 0.67 +1.9 224,367 - H281DRAFT_05254 0.67 -1.4 224,367 - H281DRAFT_05254 0.67 -0.4 224,718 - H281DRAFT_05254 0.85 +1.4 225,092 + -0.4 225,093 - +0.4 225,095 + +0.2 225,096 - -1.0 225,672 + H281DRAFT_05256 0.49 +1.4
Or see this region's nucleotide sequence