Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11305

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11295 and BWI76_RS11300 are separated by 82 nucleotidesBWI76_RS11300 and BWI76_RS11305 are separated by 54 nucleotidesBWI76_RS11305 and BWI76_RS11310 are separated by 3 nucleotidesBWI76_RS11310 and BWI76_RS11315 are separated by 59 nucleotides BWI76_RS11295: BWI76_RS11295 - AraC family transcriptional regulator, at 2,381,907 to 2,382,713 _RS11295 BWI76_RS11300: BWI76_RS11300 - cupin, at 2,382,796 to 2,383,158 _RS11300 BWI76_RS11305: BWI76_RS11305 - adenylosuccinate lyase, at 2,383,213 to 2,384,583 _RS11305 BWI76_RS11310: BWI76_RS11310 - lysogenization protein HflD, at 2,384,587 to 2,385,228 _RS11310 BWI76_RS11315: BWI76_RS11315 - tRNA 2-thiouridine(34) synthase MnmA, at 2,385,288 to 2,386,394 _RS11315 Position (kb) 2383 2384 2385Strain fitness (log2 ratio) -2 -1 0 1at 2382.749 kb on - strandat 2382.780 kb on - strandat 2382.815 kb on - strandat 2382.893 kb on - strand, within BWI76_RS11300

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
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2,382,749 - -0.7
2,382,780 - -0.8
2,382,815 - -0.4
2,382,893 - BWI76_RS11300 0.27 -1.8

Or see this region's nucleotide sequence