Experiment: Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03727 and H281DRAFT_03728 are separated by 33 nucleotides H281DRAFT_03728 and H281DRAFT_03729 are separated by 98 nucleotides H281DRAFT_03729 and H281DRAFT_03730 are separated by 102 nucleotides H281DRAFT_03730 and H281DRAFT_03731 overlap by 1 nucleotides
H281DRAFT_03727: H281DRAFT_03727 - Predicted metal-binding membrane protein, at 241,788 to 242,633
_03727
H281DRAFT_03728: H281DRAFT_03728 - Uncharacterized conserved protein, DUF1697 family, at 242,667 to 243,176
_03728
H281DRAFT_03729: H281DRAFT_03729 - carbohydrate ABC transporter substrate-binding protein, CUT1 family, at 243,275 to 245,014
_03729
H281DRAFT_03730: H281DRAFT_03730 - Predicted small integral membrane protein, at 245,117 to 245,398
_03730
H281DRAFT_03731: H281DRAFT_03731 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 245,398 to 246,210
_03731
Position (kb) 243
244
245
246 Strain fitness (log2 ratio) -2
-1
0
1 at 242.412 kb on + strand, within H281DRAFT_03727 at 242.413 kb on - strand, within H281DRAFT_03727 at 242.425 kb on + strand, within H281DRAFT_03727 at 242.526 kb on - strand, within H281DRAFT_03727 at 243.070 kb on - strand, within H281DRAFT_03728 at 243.318 kb on + strand at 243.567 kb on + strand, within H281DRAFT_03729 at 243.621 kb on + strand, within H281DRAFT_03729 at 243.622 kb on - strand, within H281DRAFT_03729 at 243.852 kb on + strand, within H281DRAFT_03729 at 243.853 kb on - strand, within H281DRAFT_03729 at 244.151 kb on + strand, within H281DRAFT_03729 at 244.152 kb on - strand, within H281DRAFT_03729 at 244.152 kb on - strand, within H281DRAFT_03729 at 244.316 kb on - strand, within H281DRAFT_03729 at 244.339 kb on - strand, within H281DRAFT_03729 at 244.642 kb on - strand, within H281DRAFT_03729 at 244.767 kb on + strand, within H281DRAFT_03729 at 245.456 kb on - strand at 245.702 kb on + strand, within H281DRAFT_03731 at 245.808 kb on - strand, within H281DRAFT_03731 at 245.993 kb on + strand, within H281DRAFT_03731 at 245.994 kb on - strand, within H281DRAFT_03731 at 246.012 kb on - strand, within H281DRAFT_03731
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days remove 242,412 + H281DRAFT_03727 0.74 -0.0 242,413 - H281DRAFT_03727 0.74 -0.5 242,425 + H281DRAFT_03727 0.75 -0.5 242,526 - H281DRAFT_03727 0.87 -0.3 243,070 - H281DRAFT_03728 0.79 -1.6 243,318 + -0.8 243,567 + H281DRAFT_03729 0.17 +0.5 243,621 + H281DRAFT_03729 0.20 +0.2 243,622 - H281DRAFT_03729 0.20 -0.0 243,852 + H281DRAFT_03729 0.33 -0.4 243,853 - H281DRAFT_03729 0.33 -0.5 244,151 + H281DRAFT_03729 0.50 +0.6 244,152 - H281DRAFT_03729 0.50 -0.1 244,152 - H281DRAFT_03729 0.50 -0.9 244,316 - H281DRAFT_03729 0.60 +0.1 244,339 - H281DRAFT_03729 0.61 -1.6 244,642 - H281DRAFT_03729 0.79 +0.4 244,767 + H281DRAFT_03729 0.86 +0.4 245,456 - -0.5 245,702 + H281DRAFT_03731 0.37 -0.2 245,808 - H281DRAFT_03731 0.50 +0.2 245,993 + H281DRAFT_03731 0.73 -0.2 245,994 - H281DRAFT_03731 0.73 -2.5 246,012 - H281DRAFT_03731 0.76 +0.7
Or see this region's nucleotide sequence