Experiment: Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01856 and H281DRAFT_01857 are separated by 756 nucleotides H281DRAFT_01857 and H281DRAFT_01858 are separated by 288 nucleotides H281DRAFT_01858 and H281DRAFT_01859 are separated by 128 nucleotides
H281DRAFT_01856: H281DRAFT_01856 - xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 768,061 to 770,457
_01856
H281DRAFT_01857: H281DRAFT_01857 - hypothetical protein, at 771,214 to 771,471
_01857
H281DRAFT_01858: H281DRAFT_01858 - hypothetical protein, at 771,760 to 772,068
_01858
H281DRAFT_01859: H281DRAFT_01859 - Protein of unknown function (DUF3300), at 772,197 to 773,582
_01859
Position (kb) 771
772 Strain fitness (log2 ratio) -1
0
1 at 770.335 kb on + strand at 770.343 kb on - strand at 770.458 kb on - strand at 770.522 kb on + strand at 770.522 kb on + strand at 770.714 kb on + strand at 770.918 kb on - strand at 770.924 kb on + strand at 771.058 kb on + strand at 771.360 kb on + strand, within H281DRAFT_01857 at 772.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days remove 770,335 + +1.0 770,343 - -0.1 770,458 - +0.3 770,522 + +1.0 770,522 + +1.3 770,714 + +0.3 770,918 - -0.9 770,924 + +0.7 771,058 + -0.1 771,360 + H281DRAFT_01857 0.57 -0.5 772,124 - +0.4
Or see this region's nucleotide sequence