Experiment: Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00712 and H281DRAFT_00713 are separated by 195 nucleotides H281DRAFT_00713 and H281DRAFT_00714 are separated by 64 nucleotides H281DRAFT_00714 and H281DRAFT_00715 are separated by 63 nucleotides
H281DRAFT_00712: H281DRAFT_00712 - RNAse R, at 799,117 to 801,618
_00712
H281DRAFT_00713: H281DRAFT_00713 - 23S rRNA Gm-2251 2'-O-methyltransferase, at 801,814 to 802,557
_00713
H281DRAFT_00714: H281DRAFT_00714 - ribose-5-phosphate isomerase, at 802,622 to 803,317
_00714
H281DRAFT_00715: H281DRAFT_00715 - Glycosyltransferase involved in cell wall bisynthesis, at 803,381 to 804,709
_00715
Position (kb) 801
802
803 Strain fitness (log2 ratio) -2
-1
0
1 at 801.097 kb on + strand, within H281DRAFT_00712 at 801.127 kb on + strand, within H281DRAFT_00712 at 801.238 kb on + strand, within H281DRAFT_00712 at 801.654 kb on - strand at 801.756 kb on + strand at 801.756 kb on + strand at 801.756 kb on + strand at 801.756 kb on + strand at 801.757 kb on - strand at 801.758 kb on + strand at 801.758 kb on + strand at 801.759 kb on - strand at 801.833 kb on + strand at 801.835 kb on + strand at 801.898 kb on + strand at 802.267 kb on + strand, within H281DRAFT_00713 at 802.267 kb on + strand, within H281DRAFT_00713 at 802.268 kb on - strand, within H281DRAFT_00713 at 802.363 kb on + strand, within H281DRAFT_00713 at 802.555 kb on + strand at 803.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days remove 801,097 + H281DRAFT_00712 0.79 +0.8 801,127 + H281DRAFT_00712 0.80 +1.5 801,238 + H281DRAFT_00712 0.85 +0.1 801,654 - -0.3 801,756 + +0.2 801,756 + -0.1 801,756 + +1.0 801,756 + +0.4 801,757 - -0.4 801,758 + +0.1 801,758 + +0.5 801,759 - +0.4 801,833 + -2.3 801,835 + +0.7 801,898 + +1.2 802,267 + H281DRAFT_00713 0.61 +0.2 802,267 + H281DRAFT_00713 0.61 -0.3 802,268 - H281DRAFT_00713 0.61 -0.9 802,363 + H281DRAFT_00713 0.74 -1.2 802,555 + +0.2 803,461 - +0.8
Or see this region's nucleotide sequence