Experiment: Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00013 and H281DRAFT_00014 are separated by 56 nucleotides H281DRAFT_00014 and H281DRAFT_00015 are separated by 891 nucleotides
H281DRAFT_00013: H281DRAFT_00013 - Cytochrome P450, at 11,769 to 13,196
_00013
H281DRAFT_00014: H281DRAFT_00014 - FAD/FMN-containing dehydrogenases, at 13,253 to 14,596
_00014
H281DRAFT_00015: H281DRAFT_00015 - hypothetical protein, at 15,488 to 15,649
_00015
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 12.283 kb on + strand, within H281DRAFT_00013 at 12.310 kb on + strand, within H281DRAFT_00013 at 12.310 kb on + strand, within H281DRAFT_00013 at 12.311 kb on - strand, within H281DRAFT_00013 at 12.311 kb on - strand, within H281DRAFT_00013 at 12.344 kb on + strand, within H281DRAFT_00013 at 12.514 kb on + strand, within H281DRAFT_00013 at 12.571 kb on + strand, within H281DRAFT_00013 at 12.571 kb on + strand, within H281DRAFT_00013 at 12.572 kb on - strand, within H281DRAFT_00013 at 12.621 kb on + strand, within H281DRAFT_00013 at 12.621 kb on + strand, within H281DRAFT_00013 at 12.695 kb on + strand, within H281DRAFT_00013 at 12.715 kb on + strand, within H281DRAFT_00013 at 12.722 kb on + strand, within H281DRAFT_00013 at 12.723 kb on - strand, within H281DRAFT_00013 at 12.750 kb on - strand, within H281DRAFT_00013 at 12.814 kb on + strand, within H281DRAFT_00013 at 13.052 kb on - strand, within H281DRAFT_00013 at 13.310 kb on - strand at 13.361 kb on - strand at 13.361 kb on - strand at 13.369 kb on + strand at 13.370 kb on - strand at 13.478 kb on + strand, within H281DRAFT_00014 at 13.478 kb on + strand, within H281DRAFT_00014 at 13.478 kb on + strand, within H281DRAFT_00014 at 13.479 kb on - strand, within H281DRAFT_00014 at 13.704 kb on + strand, within H281DRAFT_00014 at 13.857 kb on + strand, within H281DRAFT_00014 at 13.857 kb on + strand, within H281DRAFT_00014 at 13.857 kb on + strand, within H281DRAFT_00014 at 13.858 kb on - strand, within H281DRAFT_00014 at 14.127 kb on + strand, within H281DRAFT_00014 at 14.297 kb on + strand, within H281DRAFT_00014 at 14.297 kb on + strand, within H281DRAFT_00014 at 14.298 kb on - strand, within H281DRAFT_00014 at 14.298 kb on - strand, within H281DRAFT_00014 at 14.509 kb on - strand at 14.663 kb on + strand at 14.665 kb on + strand at 14.666 kb on - strand at 14.666 kb on - strand at 14.666 kb on - strand at 14.683 kb on - strand at 14.686 kb on + strand at 14.687 kb on - strand at 14.694 kb on - strand at 14.746 kb on - strand at 14.754 kb on + strand at 14.754 kb on + strand at 14.770 kb on + strand at 14.770 kb on + strand at 14.771 kb on - strand at 14.864 kb on + strand at 14.864 kb on + strand at 14.864 kb on + strand at 15.161 kb on + strand at 15.162 kb on - strand at 15.162 kb on - strand at 15.182 kb on + strand at 15.183 kb on - strand at 15.262 kb on - strand at 15.395 kb on + strand at 15.396 kb on - strand at 15.396 kb on - strand at 15.540 kb on + strand, within H281DRAFT_00015
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days remove 12,283 + H281DRAFT_00013 0.36 +0.6 12,310 + H281DRAFT_00013 0.38 +0.6 12,310 + H281DRAFT_00013 0.38 +0.3 12,311 - H281DRAFT_00013 0.38 -0.4 12,311 - H281DRAFT_00013 0.38 +2.0 12,344 + H281DRAFT_00013 0.40 +0.2 12,514 + H281DRAFT_00013 0.52 -1.0 12,571 + H281DRAFT_00013 0.56 +0.4 12,571 + H281DRAFT_00013 0.56 +0.3 12,572 - H281DRAFT_00013 0.56 +0.1 12,621 + H281DRAFT_00013 0.60 -1.3 12,621 + H281DRAFT_00013 0.60 +1.0 12,695 + H281DRAFT_00013 0.65 -2.6 12,715 + H281DRAFT_00013 0.66 +0.2 12,722 + H281DRAFT_00013 0.67 +1.6 12,723 - H281DRAFT_00013 0.67 +0.2 12,750 - H281DRAFT_00013 0.69 -0.2 12,814 + H281DRAFT_00013 0.73 +0.8 13,052 - H281DRAFT_00013 0.90 +0.4 13,310 - +0.4 13,361 - +0.1 13,361 - -1.1 13,369 + +1.6 13,370 - +0.3 13,478 + H281DRAFT_00014 0.17 +0.6 13,478 + H281DRAFT_00014 0.17 +0.8 13,478 + H281DRAFT_00014 0.17 +0.2 13,479 - H281DRAFT_00014 0.17 -1.4 13,704 + H281DRAFT_00014 0.34 +1.2 13,857 + H281DRAFT_00014 0.45 +0.3 13,857 + H281DRAFT_00014 0.45 +0.9 13,857 + H281DRAFT_00014 0.45 +0.7 13,858 - H281DRAFT_00014 0.45 -0.5 14,127 + H281DRAFT_00014 0.65 +0.5 14,297 + H281DRAFT_00014 0.78 -0.4 14,297 + H281DRAFT_00014 0.78 -0.7 14,298 - H281DRAFT_00014 0.78 +0.3 14,298 - H281DRAFT_00014 0.78 -0.4 14,509 - -0.3 14,663 + +0.9 14,665 + -1.0 14,666 - +0.4 14,666 - +0.2 14,666 - +0.3 14,683 - +0.2 14,686 + -0.5 14,687 - -0.3 14,694 - +1.3 14,746 - -0.4 14,754 + -0.3 14,754 + +0.0 14,770 + +0.2 14,770 + +0.3 14,771 - -0.0 14,864 + -0.4 14,864 + +1.4 14,864 + -1.3 15,161 + -0.0 15,162 - +1.0 15,162 - -1.5 15,182 + -1.8 15,183 - +0.1 15,262 - -0.8 15,395 + -2.0 15,396 - +1.8 15,396 - -0.4 15,540 + H281DRAFT_00015 0.32 -3.1
Or see this region's nucleotide sequence