Experiment: Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0264 and BT0265 are separated by 41 nucleotides BT0265 and BT0266 are separated by 12 nucleotides
BT0264: BT0264 - conserved hypothetical protein (NCBI ptt file), at 294,837 to 296,585
BT0264
BT0265: BT0265 - conserved hypothetical protein (NCBI ptt file), at 296,627 to 298,108
BT0265
BT0266: BT0266 - hypothetical protein (NCBI ptt file), at 298,121 to 299,581
BT0266
Position (kb) 296
297
298
299 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 295.680 kb on + strand, within BT0264 at 295.715 kb on + strand, within BT0264 at 295.725 kb on + strand, within BT0264 at 295.728 kb on - strand, within BT0264 at 295.827 kb on - strand, within BT0264 at 296.114 kb on - strand, within BT0264 at 296.196 kb on - strand, within BT0264 at 296.196 kb on - strand, within BT0264 at 296.285 kb on + strand, within BT0264 at 296.294 kb on + strand, within BT0264 at 296.295 kb on - strand, within BT0264 at 296.295 kb on - strand, within BT0264 at 296.311 kb on + strand, within BT0264 at 296.321 kb on - strand, within BT0264 at 296.372 kb on - strand, within BT0264 at 296.410 kb on - strand, within BT0264 at 296.468 kb on + strand at 296.530 kb on - strand at 296.530 kb on - strand at 296.530 kb on - strand at 296.536 kb on - strand at 296.537 kb on + strand at 296.538 kb on - strand at 296.614 kb on - strand at 296.679 kb on - strand at 296.699 kb on - strand at 296.808 kb on + strand, within BT0265 at 296.816 kb on - strand, within BT0265 at 296.832 kb on - strand, within BT0265 at 296.974 kb on + strand, within BT0265 at 296.999 kb on + strand, within BT0265 at 297.121 kb on + strand, within BT0265 at 297.130 kb on - strand, within BT0265 at 297.130 kb on - strand, within BT0265 at 297.261 kb on + strand, within BT0265 at 297.262 kb on - strand, within BT0265 at 297.264 kb on - strand, within BT0265 at 297.265 kb on + strand, within BT0265 at 297.266 kb on - strand, within BT0265 at 297.300 kb on + strand, within BT0265 at 297.378 kb on - strand, within BT0265 at 297.448 kb on - strand, within BT0265 at 297.448 kb on - strand, within BT0265 at 297.451 kb on + strand, within BT0265 at 297.541 kb on + strand, within BT0265 at 297.541 kb on + strand, within BT0265 at 297.578 kb on - strand, within BT0265 at 297.607 kb on + strand, within BT0265 at 297.669 kb on - strand, within BT0265 at 297.669 kb on - strand, within BT0265 at 297.767 kb on - strand, within BT0265 at 297.780 kb on + strand, within BT0265 at 297.820 kb on + strand, within BT0265 at 297.885 kb on + strand, within BT0265 at 297.912 kb on - strand, within BT0265 at 297.997 kb on + strand at 298.095 kb on - strand at 298.136 kb on - strand at 298.139 kb on - strand at 298.142 kb on + strand at 298.165 kb on - strand at 298.207 kb on + strand at 298.210 kb on + strand at 298.240 kb on + strand at 298.271 kb on + strand, within BT0266 at 298.357 kb on + strand, within BT0266 at 298.499 kb on + strand, within BT0266 at 298.529 kb on + strand, within BT0266 at 298.582 kb on + strand, within BT0266 at 298.618 kb on + strand, within BT0266 at 298.693 kb on + strand, within BT0266 at 298.701 kb on - strand, within BT0266 at 298.719 kb on - strand, within BT0266 at 298.849 kb on - strand, within BT0266 at 298.985 kb on + strand, within BT0266 at 299.010 kb on + strand, within BT0266 at 299.010 kb on + strand, within BT0266 at 299.098 kb on + strand, within BT0266 at 299.098 kb on + strand, within BT0266 at 299.101 kb on - strand, within BT0266
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM remove 295,680 + BT0264 0.48 -1.6 295,715 + BT0264 0.50 -1.6 295,725 + BT0264 0.51 -1.6 295,728 - BT0264 0.51 +0.0 295,827 - BT0264 0.57 -1.0 296,114 - BT0264 0.73 +0.6 296,196 - BT0264 0.78 -0.2 296,196 - BT0264 0.78 +0.0 296,285 + BT0264 0.83 -1.6 296,294 + BT0264 0.83 +0.4 296,295 - BT0264 0.83 -1.6 296,295 - BT0264 0.83 +2.0 296,311 + BT0264 0.84 +0.3 296,321 - BT0264 0.85 -1.0 296,372 - BT0264 0.88 -1.2 296,410 - BT0264 0.90 -1.2 296,468 + -2.3 296,530 - -0.4 296,530 - +0.0 296,530 - -1.9 296,536 - -1.0 296,537 + -1.0 296,538 - -2.3 296,614 - -3.5 296,679 - +0.0 296,699 - +1.0 296,808 + BT0265 0.12 -1.6 296,816 - BT0265 0.13 +0.5 296,832 - BT0265 0.14 -1.0 296,974 + BT0265 0.23 +3.4 296,999 + BT0265 0.25 +2.4 297,121 + BT0265 0.33 -1.8 297,130 - BT0265 0.34 +1.4 297,130 - BT0265 0.34 +1.6 297,261 + BT0265 0.43 +0.8 297,262 - BT0265 0.43 -2.8 297,264 - BT0265 0.43 -1.2 297,265 + BT0265 0.43 +0.0 297,266 - BT0265 0.43 +1.6 297,300 + BT0265 0.45 -1.0 297,378 - BT0265 0.51 +0.0 297,448 - BT0265 0.55 +0.0 297,448 - BT0265 0.55 +0.0 297,451 + BT0265 0.56 +0.8 297,541 + BT0265 0.62 +2.6 297,541 + BT0265 0.62 -2.5 297,578 - BT0265 0.64 +0.9 297,607 + BT0265 0.66 +0.3 297,669 - BT0265 0.70 +0.8 297,669 - BT0265 0.70 -2.3 297,767 - BT0265 0.77 +1.6 297,780 + BT0265 0.78 +0.3 297,820 + BT0265 0.80 -1.7 297,885 + BT0265 0.85 +0.0 297,912 - BT0265 0.87 +0.0 297,997 + -3.5 298,095 - -0.2 298,136 - +1.0 298,139 - -1.0 298,142 + -1.0 298,165 - +0.0 298,207 + -1.3 298,210 + +1.0 298,240 + +0.0 298,271 + BT0266 0.10 +0.5 298,357 + BT0266 0.16 +0.0 298,499 + BT0266 0.26 -2.1 298,529 + BT0266 0.28 -0.4 298,582 + BT0266 0.32 +0.0 298,618 + BT0266 0.34 -2.1 298,693 + BT0266 0.39 +1.0 298,701 - BT0266 0.40 -2.0 298,719 - BT0266 0.41 +0.6 298,849 - BT0266 0.50 +0.0 298,985 + BT0266 0.59 +0.0 299,010 + BT0266 0.61 -1.5 299,010 + BT0266 0.61 -0.7 299,098 + BT0266 0.67 -1.0 299,098 + BT0266 0.67 +0.0 299,101 - BT0266 0.67 -1.0
Or see this region's nucleotide sequence