Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20580

Experiment: malate (C) and Ammonium chloride (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with TAPS; with PEG
4,633,658	+		PFLU_RS20570	0.76	+0.4
4,633,658	+		PFLU_RS20570	0.76	-0.5
4,633,658	+		PFLU_RS20570	0.76	-0.4
4,633,659	-		PFLU_RS20570	0.76	+0.0
4,633,734	+		PFLU_RS20570	0.86	+0.7
4,633,735	-		PFLU_RS20570	0.86	-0.3
4,633,764	+		PFLU_RS20570	0.90	+0.4
4,633,781	-				-0.7
4,633,872	+				-0.7
4,633,873	-				+0.9
4,633,873	-				-0.9
4,633,873	-				+0.1
4,633,873	-				+2.9
4,633,979	+				+0.7
4,633,979	+				-0.3
4,633,979	+				+0.6
4,633,979	+				+0.2
4,633,979	+				+0.5
4,633,979	+				+0.4
4,633,980	-				+0.8
4,633,980	-				-0.4
4,633,980	-				-0.7
4,633,980	-				+0.2
4,633,980	-				+0.0
4,633,980	-				+0.2
4,633,980	-				-0.5
4,633,987	-				+0.6
4,634,133	+		PFLU_RS20575	0.22	-3.3
4,634,133	+		PFLU_RS20575	0.22	-4.2
4,634,133	+		PFLU_RS20575	0.22	-2.7
4,634,133	+		PFLU_RS20575	0.22	-3.6
4,634,133	+		PFLU_RS20575	0.22	-4.0
4,634,133	+		PFLU_RS20575	0.22	-3.6
4,634,134	-		PFLU_RS20575	0.23	-3.7
4,634,134	-		PFLU_RS20575	0.23	-3.5
4,634,134	-		PFLU_RS20575	0.23	-1.8
4,634,298	+		PFLU_RS20575	0.48	-2.5
4,634,299	-		PFLU_RS20575	0.48	-3.1
4,634,299	-		PFLU_RS20575	0.48	-4.6
4,634,328	+		PFLU_RS20575	0.53	-3.8
4,634,328	+		PFLU_RS20575	0.53	-3.7
4,634,328	+		PFLU_RS20575	0.53	-3.1
4,634,412	+		PFLU_RS20575	0.66	-1.4
4,634,470	-		PFLU_RS20575	0.75	-3.0
4,634,476	-		PFLU_RS20575	0.76	-2.2
4,634,476	-		PFLU_RS20575	0.76	-2.4
4,634,620	+				-3.2
4,634,620	+				-2.9
4,634,620	+				-2.0
4,634,620	+				-2.8
4,634,621	-				-3.6
4,634,638	-				-0.7
4,634,753	+				-1.5
4,634,753	+				-3.1
4,634,754	-				-2.7
4,635,021	+		PFLU_RS20580	0.27	-3.4
4,635,021	+		PFLU_RS20580	0.27	-3.0
4,635,021	+		PFLU_RS20580	0.27	-2.6
4,635,021	+		PFLU_RS20580	0.27	-1.8
4,635,022	-		PFLU_RS20580	0.27	+0.0
4,635,022	-		PFLU_RS20580	0.27	-3.6
4,635,073	+		PFLU_RS20580	0.30	-2.3
4,635,073	+		PFLU_RS20580	0.30	-2.3
4,635,073	+		PFLU_RS20580	0.30	-1.5
4,635,073	+		PFLU_RS20580	0.30	-2.8
4,635,073	+		PFLU_RS20580	0.30	-2.8
4,635,073	+		PFLU_RS20580	0.30	-2.1
4,635,073	+		PFLU_RS20580	0.30	-1.2
4,635,073	+		PFLU_RS20580	0.30	-2.8
4,635,073	+		PFLU_RS20580	0.30	-2.2
4,635,073	+		PFLU_RS20580	0.30	-1.0
4,635,073	+		PFLU_RS20580	0.30	-2.0
4,635,073	+		PFLU_RS20580	0.30	-3.4
4,635,073	+		PFLU_RS20580	0.30	-2.4
4,635,074	-		PFLU_RS20580	0.30	-2.4
4,635,074	-		PFLU_RS20580	0.30	-2.9
4,635,074	-		PFLU_RS20580	0.30	-0.7
4,635,074	-		PFLU_RS20580	0.30	-2.1
4,635,074	-		PFLU_RS20580	0.30	-2.4
4,635,074	-		PFLU_RS20580	0.30	-3.3
4,635,074	-		PFLU_RS20580	0.30	-4.9
4,635,074	-		PFLU_RS20580	0.30	-2.0
4,635,074	-		PFLU_RS20580	0.30	-1.1
4,635,074	-		PFLU_RS20580	0.30	-3.1
4,635,074	-		PFLU_RS20580	0.30	-3.4
4,635,074	-		PFLU_RS20580	0.30	-3.7
4,635,074	-		PFLU_RS20580	0.30	-2.6
4,635,123	-		PFLU_RS20580	0.34	-3.3
4,635,322	+		PFLU_RS20580	0.48	-3.4
4,635,322	+		PFLU_RS20580	0.48	-3.0
4,635,322	+		PFLU_RS20580	0.48	-2.1
4,635,322	+		PFLU_RS20580	0.48	-2.8
4,635,323	-		PFLU_RS20580	0.48	-3.6
4,635,323	-		PFLU_RS20580	0.48	-4.3
4,635,323	-		PFLU_RS20580	0.48	-3.0
4,635,323	-		PFLU_RS20580	0.48	-2.8
4,635,323	-		PFLU_RS20580	0.48	-4.3
4,635,323	-		PFLU_RS20580	0.48	-2.4
4,635,470	+		PFLU_RS20580	0.58	-1.6
4,635,551	+		PFLU_RS20580	0.64	-1.2
4,635,551	+		PFLU_RS20580	0.64	-1.8
4,635,551	+		PFLU_RS20580	0.64	-1.6
4,635,551	+		PFLU_RS20580	0.64	-2.3
4,635,551	+		PFLU_RS20580	0.64	-1.4
4,635,551	+		PFLU_RS20580	0.64	-3.8
4,635,551	+		PFLU_RS20580	0.64	-2.4
4,635,551	+		PFLU_RS20580	0.64	-2.9
4,635,551	+		PFLU_RS20580	0.64	-0.8
4,635,551	+		PFLU_RS20580	0.64	-2.4
4,635,551	+		PFLU_RS20580	0.64	-1.4
4,635,551	+		PFLU_RS20580	0.64	-2.3
4,635,551	+		PFLU_RS20580	0.64	-1.1
4,635,551	+		PFLU_RS20580	0.64	-1.3
4,635,551	+		PFLU_RS20580	0.64	-2.4
4,635,551	+		PFLU_RS20580	0.64	-3.4
4,635,551	+		PFLU_RS20580	0.64	-2.2
4,635,552	-		PFLU_RS20580	0.64	-2.0
4,635,552	-		PFLU_RS20580	0.64	-1.7
4,635,552	-		PFLU_RS20580	0.64	-3.0
4,635,552	-		PFLU_RS20580	0.64	-2.7
4,635,552	-		PFLU_RS20580	0.64	-2.4
4,635,552	-		PFLU_RS20580	0.64	-1.0
4,635,552	-		PFLU_RS20580	0.64	-2.4
4,635,552	-		PFLU_RS20580	0.64	-2.3
4,635,552	-		PFLU_RS20580	0.64	-1.8
4,635,552	-		PFLU_RS20580	0.64	-2.9
4,635,552	-		PFLU_RS20580	0.64	-2.1
4,635,552	-		PFLU_RS20580	0.64	-3.5
4,635,552	-		PFLU_RS20580	0.64	-3.7
4,635,552	-		PFLU_RS20580	0.64	-3.8
4,635,552	-		PFLU_RS20580	0.64	-3.8
4,635,552	-		PFLU_RS20580	0.64	-2.4
4,635,552	-		PFLU_RS20580	0.64	-0.4
4,635,770	-		PFLU_RS20580	0.79	-4.0
4,635,770	-		PFLU_RS20580	0.79	-3.1
4,635,781	+		PFLU_RS20580	0.80	-1.3
4,635,781	+		PFLU_RS20580	0.80	-2.7
4,635,781	+		PFLU_RS20580	0.80	-1.2
4,635,782	-		PFLU_RS20580	0.80	-1.1
4,635,864	+		PFLU_RS20580	0.86	-1.8
4,635,864	+		PFLU_RS20580	0.86	-3.5
4,635,864	+		PFLU_RS20580	0.86	-2.2
4,635,864	+		PFLU_RS20580	0.86	-2.2
4,635,865	-		PFLU_RS20580	0.86	-3.3
4,635,865	-		PFLU_RS20580	0.86	-2.5
4,635,982	+				-1.7
4,635,982	+				-2.5
4,635,982	+				-1.8
4,635,982	+				-2.8
4,635,982	+				-3.6
4,635,982	+				-2.0
4,635,982	+				-2.8
4,635,982	+				-2.4
4,635,982	+				-1.6
4,635,982	+				-2.5
4,635,982	+				-3.8
4,635,982	+				-1.6
4,635,982	+				-1.9
4,635,982	+				-3.1
4,635,982	+				-2.1
4,635,983	-				-1.7
4,635,983	-				-1.7
4,635,983	-				-2.5
4,635,983	-				+1.0
4,635,983	-				-2.3
4,635,983	-				-0.6
4,635,983	-				-2.3
4,635,983	-				-2.2
4,635,983	-				-1.8
4,635,983	-				-1.8
4,635,983	-				-2.6
4,636,043	-				-1.8
4,636,043	-				-1.0
4,636,091	-				-1.2
4,636,091	-				-0.8
4,636,135	-				-0.1
4,636,135	-				-0.1
4,636,142	+				-0.9
4,636,142	+				-4.1
4,636,147	+				-4.1
4,636,228	+				-2.0
4,636,228	+				+1.1
4,636,228	+				+0.0
4,636,228	+				-0.4
4,636,228	+				+1.2
4,636,229	-				+0.7
4,636,229	-				+0.2
4,636,329	+		PFLU_RS20585	0.14	-2.0
4,636,329	+		PFLU_RS20585	0.14	-0.5
4,636,329	+		PFLU_RS20585	0.14	-0.1
4,636,329	+		PFLU_RS20585	0.14	+1.6
4,636,329	+		PFLU_RS20585	0.14	+0.2
4,636,329	+		PFLU_RS20585	0.14	-0.5
4,636,329	+		PFLU_RS20585	0.14	-1.2
4,636,330	-		PFLU_RS20585	0.14	+0.9
4,636,330	-		PFLU_RS20585	0.14	+0.2
4,636,330	-		PFLU_RS20585	0.14	-0.2
4,636,330	-		PFLU_RS20585	0.14	+0.7
4,636,330	-		PFLU_RS20585	0.14	-0.3
4,636,330	-		PFLU_RS20585	0.14	+0.3
4,636,330	-		PFLU_RS20585	0.14	-0.4
4,636,330	-		PFLU_RS20585	0.14	-0.3
4,636,330	-		PFLU_RS20585	0.14	-0.5
4,636,330	-		PFLU_RS20585	0.14	-0.6
4,636,406	+		PFLU_RS20585	0.23	+0.6
4,636,406	+		PFLU_RS20585	0.23	+0.3
4,636,598	+		PFLU_RS20585	0.44	-1.4
4,636,598	+		PFLU_RS20585	0.44	-0.1
4,636,801	+		PFLU_RS20585	0.67	-1.6
4,636,801	+		PFLU_RS20585	0.67	-0.6
4,636,810	+		PFLU_RS20585	0.68	-0.4
4,636,810	+		PFLU_RS20585	0.68	-1.0
4,636,810	+		PFLU_RS20585	0.68	-1.2
4,636,810	+		PFLU_RS20585	0.68	+0.0
4,636,810	+		PFLU_RS20585	0.68	-0.9
4,636,810	+		PFLU_RS20585	0.68	-2.6
4,636,810	+		PFLU_RS20585	0.68	+0.6
4,636,810	+		PFLU_RS20585	0.68	+1.6
4,636,810	+		PFLU_RS20585	0.68	+1.4
4,636,810	+		PFLU_RS20585	0.68	+0.2
4,636,810	+		PFLU_RS20585	0.68	+0.0
4,636,811	-		PFLU_RS20585	0.68	+0.0
4,636,811	-		PFLU_RS20585	0.68	-0.7
4,636,811	-		PFLU_RS20585	0.68	-0.3
4,636,811	-		PFLU_RS20585	0.68	-0.5
4,636,811	-		PFLU_RS20585	0.68	-1.3
4,636,811	-		PFLU_RS20585	0.68	-0.5
4,636,867	+		PFLU_RS20585	0.75	-0.4
4,636,867	+		PFLU_RS20585	0.75	+0.4
4,636,867	+		PFLU_RS20585	0.75	+1.4
4,636,867	+		PFLU_RS20585	0.75	+0.5
4,636,867	+		PFLU_RS20585	0.75	+0.2
4,636,867	+		PFLU_RS20585	0.75	-1.0
4,636,868	-		PFLU_RS20585	0.75	+0.3
4,636,868	-		PFLU_RS20585	0.75	+0.5
4,636,871	+		PFLU_RS20585	0.75	-0.7
4,636,872	-		PFLU_RS20585	0.75	+0.3
4,636,882	+		PFLU_RS20585	0.76	+0.6
4,636,882	+		PFLU_RS20585	0.76	-1.2
4,636,882	+		PFLU_RS20585	0.76	-0.2
4,636,883	-		PFLU_RS20585	0.76	-1.2
4,636,883	-		PFLU_RS20585	0.76	-1.2
4,636,883	-		PFLU_RS20585	0.76	+0.8
4,636,883	-		PFLU_RS20585	0.76	-1.5
4,636,883	-		PFLU_RS20585	0.76	-0.1
4,636,883	-		PFLU_RS20585	0.76	-0.7
4,636,883	-		PFLU_RS20585	0.76	-0.1
4,636,921	-		PFLU_RS20585	0.81	+2.9
4,636,950	+		PFLU_RS20585	0.84	-1.2
4,636,950	+		PFLU_RS20585	0.84	-0.7
4,636,950	+		PFLU_RS20585	0.84	-1.1
4,636,951	-		PFLU_RS20585	0.84	-0.2
4,636,951	-		PFLU_RS20585	0.84	-1.0
4,636,958	-		PFLU_RS20585	0.85	+0.5
4,636,958	-		PFLU_RS20585	0.85	+0.6
4,636,974	+		PFLU_RS20585	0.87	-1.1
4,636,974	+		PFLU_RS20585	0.87	+0.0
4,636,974	+		PFLU_RS20585	0.87	+0.4
4,636,974	+		PFLU_RS20585	0.87	+0.4
4,636,975	-		PFLU_RS20585	0.87	-1.7
4,636,975	-		PFLU_RS20585	0.87	-0.3
4,636,975	-		PFLU_RS20585	0.87	+1.1
4,636,975	-		PFLU_RS20585	0.87	+0.9
4,636,992	+		PFLU_RS20585	0.89	+1.6
4,636,992	+		PFLU_RS20585	0.89	-0.1
4,636,992	+		PFLU_RS20585	0.89	+0.4
4,636,992	+		PFLU_RS20585	0.89	-1.6
4,636,992	+		PFLU_RS20585	0.89	-0.6
4,636,992	+		PFLU_RS20585	0.89	+0.3
4,636,992	+		PFLU_RS20585	0.89	-0.0
4,636,992	+		PFLU_RS20585	0.89	-0.4
4,636,992	+		PFLU_RS20585	0.89	+0.8
4,636,993	-		PFLU_RS20585	0.89	+0.2
4,636,993	-		PFLU_RS20585	0.89	+0.1
4,636,993	-		PFLU_RS20585	0.89	-0.1
4,636,993	-		PFLU_RS20585	0.89	+0.6
4,636,993	-		PFLU_RS20585	0.89	-0.2
4,636,993	-		PFLU_RS20585	0.89	+0.6
4,636,993	-		PFLU_RS20585	0.89	-0.8
4,636,993	-		PFLU_RS20585	0.89	-0.4
4,636,993	-		PFLU_RS20585	0.89	+0.3
4,636,997	+		PFLU_RS20585	0.89	+0.0
4,636,997	+		PFLU_RS20585	0.89	+0.0
4,636,997	+		PFLU_RS20585	0.89	-2.4
4,636,997	+		PFLU_RS20585	0.89	+0.3
4,636,997	+		PFLU_RS20585	0.89	+0.2
4,636,997	+		PFLU_RS20585	0.89	-0.0
4,636,997	+		PFLU_RS20585	0.89	+0.6
4,636,997	+		PFLU_RS20585	0.89	+0.1
4,636,997	+		PFLU_RS20585	0.89	-0.5
4,636,997	+		PFLU_RS20585	0.89	-1.1
4,636,997	+		PFLU_RS20585	0.89	-1.8
4,636,997	+		PFLU_RS20585	0.89	-1.4
4,636,997	+		PFLU_RS20585	0.89	+0.1
4,636,997	+		PFLU_RS20585	0.89	-0.6
4,636,998	-		PFLU_RS20585	0.89	+0.4
4,636,998	-		PFLU_RS20585	0.89	+1.0
4,636,998	-		PFLU_RS20585	0.89	+1.1
4,636,998	-		PFLU_RS20585	0.89	-0.0
4,636,998	-		PFLU_RS20585	0.89	-0.1
4,636,998	-		PFLU_RS20585	0.89	-0.7
4,636,998	-		PFLU_RS20585	0.89	-0.1
4,636,998	-		PFLU_RS20585	0.89	-0.2
4,636,998	-		PFLU_RS20585	0.89	+0.4
4,636,998	-		PFLU_RS20585	0.89	+0.7
4,636,998	-		PFLU_RS20585	0.89	-1.3
4,636,998	-		PFLU_RS20585	0.89	+0.3
4,636,998	-		PFLU_RS20585	0.89	+0.6
4,636,998	-		PFLU_RS20585	0.89	+0.5
4,636,999	+		PFLU_RS20585	0.89	-2.3
4,636,999	+		PFLU_RS20585	0.89	+0.0
4,637,000	-		PFLU_RS20585	0.90	+0.1
4,637,000	-		PFLU_RS20585	0.90	-0.1
4,637,000	-		PFLU_RS20585	0.90	-0.1
4,637,052	+				-0.1
4,637,052	+				+0.2
4,637,053	-				-1.9
4,637,053	-				-0.7
4,637,053	-				-0.5