Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00410

Experiment: malate (C) and Ammonium chloride (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with TAPS; with PEG
81,925	+				-0.4
81,925	+				+0.9
81,925	+				-0.3
81,925	+				-0.4
81,925	+				+0.5
81,925	+				-0.4
81,925	+				-0.1
81,925	+				+1.3
81,925	+				-1.3
81,925	+				-0.2
81,925	+				-0.3
81,926	-				-0.5
81,926	-				-0.1
81,926	-				-0.6
81,926	-				+1.7
81,926	-				+0.6
81,927	+				-0.1
81,927	+				+0.0
81,927	+				+1.2
81,927	+				+0.1
81,927	+				+0.1
81,927	+				+0.3
81,927	+				+1.7
81,927	+				+0.7
81,927	+				-1.6
81,927	+				-0.6
81,927	+				+0.5
81,927	+				-0.7
81,927	+				+0.9
81,927	+				+0.2
81,927	+				+1.3
81,927	+				-0.5
81,927	+				-0.9
81,927	+				-1.2
81,927	+				-2.0
81,928	-				-0.1
81,928	-				+0.0
81,928	-				-0.2
81,928	-				+1.7
81,928	-				-2.1
81,928	-				+0.7
81,928	-				+0.4
81,928	-				-0.4
81,928	-				-2.4
81,928	-				+1.1
81,928	-				+0.4
81,928	-				-0.4
81,928	-				+0.5
81,928	-				-1.1
81,929	+				+2.3
81,929	+				+0.4
81,929	+				-0.6
81,929	+				-0.9
81,929	+				+0.6
81,929	+				-0.8
81,929	+				+0.2
81,929	+				+0.5
81,929	+				-0.1
81,929	+				-1.6
81,930	-				-0.0
81,930	-				-0.8
81,930	-				+0.8
81,930	-				+0.1
81,930	-				-0.0
81,930	-				+0.1
81,930	-				-1.0
81,930	-				+1.1
81,930	-				+0.8
81,930	-				-0.5
81,930	-				+0.5
81,930	-				+0.3
81,996	+				+0.7
81,996	+				-0.1
81,997	-				+1.7
81,997	-				-0.4
82,006	+				+0.7
82,006	+				+2.7
82,006	+				-1.2
82,006	+				-0.1
82,006	+				+0.0
82,006	+				-0.4
82,007	-				-0.6
82,007	-				+0.4
82,007	-				+0.8
82,007	-				+1.5
82,007	-				-0.6
82,007	-				-0.1
82,045	+				-0.7
82,045	+				-0.3
82,045	+				-0.8
82,045	+				+0.5
82,045	+				+0.6
82,045	+				-0.6
82,045	+				-1.6
82,045	+				-1.8
82,045	+				+0.3
82,045	+				+0.3
82,045	+				+0.4
82,046	-				+0.7
82,046	-				-0.4
82,046	-				+0.1
82,046	-				+1.1
82,046	-				+0.3
82,046	-				+0.6
82,046	-				-1.4
82,046	-				+0.0
82,046	-				-1.1
82,046	-				-0.1
82,046	-				-1.0
82,046	-				-0.8
82,046	-				-0.2
82,046	-				-0.9
82,046	-				+0.2
82,046	-				-0.8
82,088	+		PFLU_RS00405	0.14	-0.3
82,089	-		PFLU_RS00405	0.14	+0.3
82,102	+		PFLU_RS00405	0.18	+0.1
82,103	-		PFLU_RS00405	0.19	+0.1
82,103	-		PFLU_RS00405	0.19	-1.7
82,103	-		PFLU_RS00405	0.19	+0.2
82,103	-		PFLU_RS00405	0.19	-0.0
82,103	-		PFLU_RS00405	0.19	-1.2
82,103	-		PFLU_RS00405	0.19	+0.0
82,124	+		PFLU_RS00405	0.26	+0.7
82,124	+		PFLU_RS00405	0.26	-0.8
82,124	+		PFLU_RS00405	0.26	-1.2
82,124	+		PFLU_RS00405	0.26	+2.0
82,124	+		PFLU_RS00405	0.26	+0.3
82,124	+		PFLU_RS00405	0.26	-0.1
82,125	-		PFLU_RS00405	0.26	+0.3
82,125	-		PFLU_RS00405	0.26	+0.3
82,125	-		PFLU_RS00405	0.26	-0.3
82,125	-		PFLU_RS00405	0.26	+0.4
82,125	-		PFLU_RS00405	0.26	-1.5
82,125	-		PFLU_RS00405	0.26	-0.9
82,125	-		PFLU_RS00405	0.26	-1.6
82,125	-		PFLU_RS00405	0.26	+0.3
82,294	+		PFLU_RS00405	0.82	+0.4
82,294	+		PFLU_RS00405	0.82	-0.8
82,294	+		PFLU_RS00405	0.82	-0.1
82,295	-		PFLU_RS00405	0.82	-1.3
82,295	-		PFLU_RS00405	0.82	-1.2
82,333	+				+0.7
82,333	+				+0.2
82,333	+				+1.4
82,334	-				-0.3
82,346	+				+1.7
82,346	+				-0.2
82,346	+				-0.2
82,346	+				+1.1
82,346	+				+0.1
82,346	+				+0.1
82,346	+				+0.6
82,346	+				-0.1
82,346	+				+0.4
82,346	+				+0.7
82,346	+				+1.0
82,346	+				-0.1
82,346	+				-0.5
82,346	+				+0.7
82,346	+				+1.3
82,346	+				-0.2
82,346	+				+0.9
82,347	-				-0.1
82,347	-				-0.3
82,347	-				-1.4
82,347	-				-0.5
82,347	-				-0.3
82,347	-				+0.6
82,347	-				+0.1
82,347	-				-0.7
82,347	-				-0.0
82,347	-				+0.2
82,347	-				-0.5
82,347	-				-0.6
82,347	-				-0.3
82,347	-				+0.7
82,347	-				+0.1
82,353	+				+0.2
82,353	+				-2.3
82,353	+				+1.1
82,353	+				-0.1
82,353	+				+0.2
82,353	+				-1.0
82,353	+				-1.6
82,354	-				-0.2
82,354	-				+1.3
82,354	-				+0.4
82,354	-				+0.4
82,354	-				+1.1
82,354	-				-1.6
82,368	+				-0.1
82,368	+				-0.8
82,368	+				+0.2
82,368	+				+0.5
82,368	+				-0.4
82,369	-				-2.5
82,369	-				-1.4
82,369	-				+1.0
82,369	-				+0.2
82,377	+				-0.5
82,377	+				-1.1
82,377	+				-0.1
82,377	+				-1.5
82,378	-				-1.6
82,458	-		PFLU_RS00410	0.12	-1.5
82,458	-		PFLU_RS00410	0.12	-0.0
82,495	+		PFLU_RS00410	0.18	+0.4
82,495	+		PFLU_RS00410	0.18	-0.5
82,495	+		PFLU_RS00410	0.18	-0.7
82,495	+		PFLU_RS00410	0.18	-0.1
82,495	+		PFLU_RS00410	0.18	-1.6
82,495	+		PFLU_RS00410	0.18	-1.6
82,495	+		PFLU_RS00410	0.18	+0.1
82,495	+		PFLU_RS00410	0.18	-0.7
82,495	+		PFLU_RS00410	0.18	-0.5
82,495	+		PFLU_RS00410	0.18	-1.6
82,495	+		PFLU_RS00410	0.18	-0.3
82,495	+		PFLU_RS00410	0.18	-1.7
82,495	+		PFLU_RS00410	0.18	+2.0
82,495	+		PFLU_RS00410	0.18	-0.9
82,495	+		PFLU_RS00410	0.18	-1.1
82,495	+		PFLU_RS00410	0.18	-0.3
82,495	+		PFLU_RS00410	0.18	+0.1
82,495	+		PFLU_RS00410	0.18	-1.9
82,495	+		PFLU_RS00410	0.18	-1.3
82,495	+		PFLU_RS00410	0.18	-2.6
82,495	+		PFLU_RS00410	0.18	-0.3
82,496	-		PFLU_RS00410	0.18	-0.6
82,496	-		PFLU_RS00410	0.18	+1.4
82,496	-		PFLU_RS00410	0.18	-0.7
82,496	-		PFLU_RS00410	0.18	-0.6
82,496	-		PFLU_RS00410	0.18	+0.7
82,496	-		PFLU_RS00410	0.18	-2.1
82,496	-		PFLU_RS00410	0.18	-0.4
82,496	-		PFLU_RS00410	0.18	-1.6
82,496	-		PFLU_RS00410	0.18	-0.9
82,496	-		PFLU_RS00410	0.18	-0.5
82,496	-		PFLU_RS00410	0.18	-0.3
82,496	-		PFLU_RS00410	0.18	-2.3
82,496	-		PFLU_RS00410	0.18	-0.1
82,496	-		PFLU_RS00410	0.18	-0.4
82,496	-		PFLU_RS00410	0.18	-0.2
82,523	+		PFLU_RS00410	0.22	+0.2
82,524	-		PFLU_RS00410	0.22	-1.3
82,524	-		PFLU_RS00410	0.22	+0.4
82,572	+		PFLU_RS00410	0.30	+0.7
82,680	+		PFLU_RS00410	0.47	-1.4
82,680	+		PFLU_RS00410	0.47	+0.1
82,680	+		PFLU_RS00410	0.47	-1.0
82,681	-		PFLU_RS00410	0.48	-2.5
82,681	-		PFLU_RS00410	0.48	+0.3
82,681	-		PFLU_RS00410	0.48	+0.4
82,681	-		PFLU_RS00410	0.48	+0.4
82,681	-		PFLU_RS00410	0.48	-0.2
82,681	-		PFLU_RS00410	0.48	-0.4
82,820	-		PFLU_RS00410	0.70	+0.7
82,863	+		PFLU_RS00410	0.77	-0.8
82,863	+		PFLU_RS00410	0.77	-1.9
82,863	+		PFLU_RS00410	0.77	-1.4
82,863	+		PFLU_RS00410	0.77	-2.1
82,863	+		PFLU_RS00410	0.77	-2.6
82,863	+		PFLU_RS00410	0.77	+1.4
82,863	+		PFLU_RS00410	0.77	-1.0
82,863	+		PFLU_RS00410	0.77	-0.3
82,863	+		PFLU_RS00410	0.77	-2.2
82,863	+		PFLU_RS00410	0.77	-1.1
82,863	+		PFLU_RS00410	0.77	-1.5
82,863	+		PFLU_RS00410	0.77	+0.4
82,863	+		PFLU_RS00410	0.77	-0.4
82,863	+		PFLU_RS00410	0.77	-1.1
82,864	-		PFLU_RS00410	0.77	-1.3
82,864	-		PFLU_RS00410	0.77	-1.6
82,864	-		PFLU_RS00410	0.77	+0.7
82,864	-		PFLU_RS00410	0.77	-1.5
82,864	-		PFLU_RS00410	0.77	-1.1
82,864	-		PFLU_RS00410	0.77	-0.2
82,864	-		PFLU_RS00410	0.77	-1.1
82,864	-		PFLU_RS00410	0.77	-1.2
82,913	+		PFLU_RS00410	0.85	+1.7
82,914	-		PFLU_RS00410	0.85	-0.6
82,940	+		PFLU_RS00410	0.89	-0.5
82,940	+		PFLU_RS00410	0.89	-1.5
82,940	+		PFLU_RS00410	0.89	+0.2
82,940	+		PFLU_RS00410	0.89	-1.3
82,940	+		PFLU_RS00410	0.89	-1.3
82,940	+		PFLU_RS00410	0.89	-1.1
82,940	+		PFLU_RS00410	0.89	+0.3
82,940	+		PFLU_RS00410	0.89	-1.4
82,941	-		PFLU_RS00410	0.89	-0.8
82,941	-		PFLU_RS00410	0.89	-1.1
82,941	-		PFLU_RS00410	0.89	-2.4
82,941	-		PFLU_RS00410	0.89	-1.1
82,989	+				-1.7
82,989	+				-2.5
82,989	+				-0.4
82,989	+				-0.1
82,989	+				-0.3
82,989	+				-1.8
82,989	+				-0.0
82,989	+				-1.5
82,989	+				+0.2
82,989	+				-0.6
82,989	+				+0.4
82,989	+				-1.5
82,989	+				-0.7
82,989	+				-0.4
82,989	+				-0.6
82,989	+				-1.6
82,989	+				-0.3
82,989	+				-0.9
82,989	+				+0.2
82,989	+				-0.6
82,990	-				+0.1
82,990	-				-1.1
82,990	-				-0.8
82,990	-				-1.5
82,990	-				+0.1
82,990	-				-1.8
82,990	-				+0.4
82,990	-				-0.7
82,990	-				-2.0
82,990	-				+0.7
82,990	-				-1.0
82,990	-				-0.5
82,990	-				-1.3
82,990	-				-1.9
82,990	-				+0.4
82,990	-				-2.2
82,990	-				+0.8
82,990	-				-2.0
82,990	-				-0.0
82,990	-				-1.3
82,990	-				-1.1
82,990	-				+0.2
82,990	-				-0.6
82,990	-				+0.5
82,991	+				-1.8
82,991	+				+0.9
83,007	+				-0.1
83,007	+				+0.3
83,007	+				-0.5
83,007	+				+0.1
83,008	-				+0.6
83,008	-				+0.2
83,008	-				-0.2
83,025	-				-0.2
83,025	-				-0.4
83,025	-				-0.7
83,025	-				+0.7
83,035	+				-0.0
83,036	-				+0.7
83,036	-				-0.6
83,054	+				-0.1
83,055	-				+0.1
83,055	-				-0.2
83,055	-				-0.1
83,055	-				+0.6
83,055	-				-1.5
83,055	-				+0.5
83,068	+				-0.2
83,069	-				-0.9
83,069	-				+2.7
83,069	-				+0.3
83,069	-				+0.5
83,098	+				+1.4
83,099	-				-0.2
83,099	-				+0.4
83,099	-				+0.7
83,104	-				+0.6
83,158	+				-0.8
83,158	+				+1.0
83,158	+				+0.5
83,158	+				-0.2
83,158	+				+0.2
83,158	+				+0.2
83,158	+				-1.3
83,158	+				-2.0
83,158	+				-0.0
83,159	-				+1.2
83,159	-				+0.1
83,159	-				+0.1
83,159	-				-1.5
83,159	-				+2.3
83,159	-				+0.4
83,159	-				-1.0
83,159	-				-0.8
83,159	-				-1.4
83,159	-				-0.5
83,172	+				-2.0
83,172	+				-0.0
83,173	-				+0.7
83,173	-				-1.5
83,173	-				+0.1
83,173	-				-1.3
83,173	-				-1.6
83,274	+		PFLU_RS00415	0.15	-1.1
83,362	-		PFLU_RS00415	0.29	-0.6
83,426	+		PFLU_RS00415	0.39	-1.8
83,504	+		PFLU_RS00415	0.51	+1.7
83,504	+		PFLU_RS00415	0.51	+1.7
83,505	-		PFLU_RS00415	0.51	+0.7
83,505	-		PFLU_RS00415	0.51	-0.1
83,690	-		PFLU_RS00415	0.81	-2.4
83,724	+		PFLU_RS00415	0.86	+3.7
83,811	+				-0.5
83,811	+				+0.4
83,811	+				-0.1
83,811	+				+0.2
83,811	+				+0.7
83,812	-				-0.0
83,812	-				+1.1
83,812	-				-1.1
83,812	-				+0.2
83,812	-				-0.4
83,812	-				-0.7
83,812	-				+0.0
83,812	-				+1.3
83,812	-				-0.7
83,812	-				-0.2
83,968	+		PFLU_RS00420	0.16	-0.3
83,968	+		PFLU_RS00420	0.16	-0.9
83,968	+		PFLU_RS00420	0.16	-0.6
83,968	+		PFLU_RS00420	0.16	-0.5
83,968	+		PFLU_RS00420	0.16	-0.4
83,968	+		PFLU_RS00420	0.16	-0.5
83,969	-		PFLU_RS00420	0.16	-1.1
83,969	-		PFLU_RS00420	0.16	+0.5
83,969	-		PFLU_RS00420	0.16	+0.8
83,969	-		PFLU_RS00420	0.16	+0.7
83,969	-		PFLU_RS00420	0.16	-0.5
83,969	-		PFLU_RS00420	0.16	-0.4
83,969	-		PFLU_RS00420	0.16	+0.6
83,977	+		PFLU_RS00420	0.17	-1.3
83,977	+		PFLU_RS00420	0.17	-0.9
83,978	-		PFLU_RS00420	0.18	-0.6
83,978	-		PFLU_RS00420	0.18	-1.8
83,978	-		PFLU_RS00420	0.18	-0.2
83,978	-		PFLU_RS00420	0.18	+0.3
83,978	-		PFLU_RS00420	0.18	-0.2
83,978	-		PFLU_RS00420	0.18	-0.7
83,978	-		PFLU_RS00420	0.18	+0.9