Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28420

Experiment: malate (C) and Ammonium chloride (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with TAPS; with PEG
6,323,645	+		PFLU_RS28410	0.66	+1.0
6,323,645	+		PFLU_RS28410	0.66	+0.4
6,323,645	+		PFLU_RS28410	0.66	-0.8
6,323,645	+		PFLU_RS28410	0.66	+0.6
6,323,645	+		PFLU_RS28410	0.66	-0.2
6,323,645	+		PFLU_RS28410	0.66	+0.5
6,323,645	+		PFLU_RS28410	0.66	+1.8
6,323,646	-		PFLU_RS28410	0.66	+1.0
6,323,646	-		PFLU_RS28410	0.66	-0.4
6,323,646	-		PFLU_RS28410	0.66	-0.6
6,323,646	-		PFLU_RS28410	0.66	-0.3
6,323,646	-		PFLU_RS28410	0.66	-0.3
6,323,646	-		PFLU_RS28410	0.66	-1.9
6,323,646	-		PFLU_RS28410	0.66	+0.2
6,323,664	+		PFLU_RS28410	0.72	+0.4
6,323,664	+		PFLU_RS28410	0.72	-0.9
6,323,664	+		PFLU_RS28410	0.72	+1.2
6,323,664	+		PFLU_RS28410	0.72	-0.8
6,323,664	+		PFLU_RS28410	0.72	+0.4
6,323,665	-		PFLU_RS28410	0.72	+0.3
6,323,665	-		PFLU_RS28410	0.72	+1.9
6,323,665	-		PFLU_RS28410	0.72	+0.0
6,323,686	+		PFLU_RS28410	0.78	+0.7
6,323,686	+		PFLU_RS28410	0.78	+0.5
6,323,686	+		PFLU_RS28410	0.78	+0.8
6,323,687	-		PFLU_RS28410	0.79	-0.1
6,323,687	-		PFLU_RS28410	0.79	-1.7
6,323,687	-		PFLU_RS28410	0.79	+0.9
6,323,687	-		PFLU_RS28410	0.79	-0.5
6,323,687	-		PFLU_RS28410	0.79	-0.9
6,323,687	-		PFLU_RS28410	0.79	-1.6
6,323,690	+		PFLU_RS28410	0.80	+0.2
6,323,690	+		PFLU_RS28410	0.80	-1.1
6,323,690	+		PFLU_RS28410	0.80	+0.6
6,323,690	+		PFLU_RS28410	0.80	-0.6
6,323,690	+		PFLU_RS28410	0.80	-0.8
6,323,690	+		PFLU_RS28410	0.80	+0.2
6,323,690	+		PFLU_RS28410	0.80	+0.5
6,323,690	+		PFLU_RS28410	0.80	+0.0
6,323,690	+		PFLU_RS28410	0.80	+0.0
6,323,690	+		PFLU_RS28410	0.80	-0.1
6,323,690	+		PFLU_RS28410	0.80	+0.6
6,323,690	+		PFLU_RS28410	0.80	-0.0
6,323,691	-		PFLU_RS28410	0.80	+0.0
6,323,691	-		PFLU_RS28410	0.80	+0.6
6,323,691	-		PFLU_RS28410	0.80	+1.6
6,323,691	-		PFLU_RS28410	0.80	+0.0
6,323,691	-		PFLU_RS28410	0.80	+0.0
6,323,691	-		PFLU_RS28410	0.80	-0.6
6,323,718	+		PFLU_RS28410	0.88	+1.8
6,323,719	-		PFLU_RS28410	0.89	-0.3
6,323,719	-		PFLU_RS28410	0.89	-0.2
6,323,736	+				+0.0
6,323,736	+				-0.3
6,323,737	-				-0.1
6,323,775	-				-0.5
6,323,888	+				-0.9
6,323,888	+				+1.4
6,323,888	+				-0.9
6,323,888	+				+0.1
6,323,888	+				+0.3
6,323,888	+				+0.3
6,323,888	+				+0.3
6,323,888	+				-0.6
6,323,888	+				-0.5
6,323,888	+				+1.4
6,323,888	+				+0.1
6,323,888	+				+1.4
6,323,888	+				+0.5
6,323,889	-				-0.4
6,323,889	-				-0.0
6,323,889	-				-0.3
6,323,889	-				-0.6
6,323,889	-				+1.1
6,323,889	-				+0.5
6,323,899	+				+0.2
6,323,899	+				+0.2
6,323,899	+				+0.2
6,323,900	-				-0.4
6,323,900	-				-1.8
6,323,900	-				-0.5
6,323,900	-				+0.2
6,324,058	+		PFLU_RS28415	0.22	+0.8
6,324,058	+		PFLU_RS28415	0.22	-1.7
6,324,058	+		PFLU_RS28415	0.22	-0.2
6,324,058	+		PFLU_RS28415	0.22	-0.2
6,324,058	+		PFLU_RS28415	0.22	-1.8
6,324,058	+		PFLU_RS28415	0.22	-0.8
6,324,058	+		PFLU_RS28415	0.22	-0.8
6,324,058	+		PFLU_RS28415	0.22	+0.2
6,324,058	+		PFLU_RS28415	0.22	-0.6
6,324,058	+		PFLU_RS28415	0.22	+0.8
6,324,059	-		PFLU_RS28415	0.22	-0.4
6,324,059	-		PFLU_RS28415	0.22	-0.0
6,324,059	-		PFLU_RS28415	0.22	-0.2
6,324,059	-		PFLU_RS28415	0.22	+0.0
6,324,059	-		PFLU_RS28415	0.22	-0.4
6,324,059	-		PFLU_RS28415	0.22	-2.6
6,324,059	-		PFLU_RS28415	0.22	+2.0
6,324,059	-		PFLU_RS28415	0.22	-1.6
6,324,067	+		PFLU_RS28415	0.23	-0.2
6,324,219	-		PFLU_RS28415	0.44	-0.6
6,324,265	+		PFLU_RS28415	0.51	-0.9
6,324,265	+		PFLU_RS28415	0.51	-0.2
6,324,265	+		PFLU_RS28415	0.51	-0.8
6,324,265	+		PFLU_RS28415	0.51	-0.5
6,324,266	-		PFLU_RS28415	0.51	-0.2
6,324,266	-		PFLU_RS28415	0.51	-2.0
6,324,266	-		PFLU_RS28415	0.51	-1.3
6,324,266	-		PFLU_RS28415	0.51	+0.2
6,324,451	+		PFLU_RS28415	0.76	-0.3
6,324,451	+		PFLU_RS28415	0.76	-0.7
6,324,451	+		PFLU_RS28415	0.76	-0.3
6,324,451	+		PFLU_RS28415	0.76	-0.7
6,324,452	-		PFLU_RS28415	0.76	-0.7
6,324,452	-		PFLU_RS28415	0.76	-0.5
6,324,452	-		PFLU_RS28415	0.76	-1.7
6,324,494	+		PFLU_RS28415	0.82	+0.2
6,324,494	+		PFLU_RS28415	0.82	+0.2
6,324,494	+		PFLU_RS28415	0.82	-0.2
6,324,495	-		PFLU_RS28415	0.82	-0.8
6,324,634	+				-0.9
6,324,634	+				+1.4
6,324,634	+				-0.5
6,324,634	+				-1.3
6,324,634	+				+1.2
6,324,634	+				+0.1
6,324,634	+				-0.0
6,324,634	+				-0.5
6,324,634	+				-0.2
6,324,635	-				+0.6
6,324,635	-				-1.9
6,324,635	-				-1.4
6,324,635	-				+0.1
6,324,635	-				-0.3
6,324,635	-				+1.3
6,324,635	-				+1.0
6,324,635	-				+0.2
6,324,673	+				-0.6
6,324,674	-				-0.6
6,324,703	+				-1.0
6,324,703	+				-1.3
6,324,901	+		PFLU_RS28420	0.34	-0.5
6,324,901	+		PFLU_RS28420	0.34	-0.9
6,324,901	+		PFLU_RS28420	0.34	-1.2
6,324,901	+		PFLU_RS28420	0.34	-1.3
6,324,902	-		PFLU_RS28420	0.34	-0.6
6,324,902	-		PFLU_RS28420	0.34	-2.1
6,324,902	-		PFLU_RS28420	0.34	-0.8
6,324,902	-		PFLU_RS28420	0.34	+1.1
6,324,902	-		PFLU_RS28420	0.34	-0.4
6,324,902	-		PFLU_RS28420	0.34	-1.3
6,324,902	-		PFLU_RS28420	0.34	-1.1
6,324,902	-		PFLU_RS28420	0.34	-1.1
6,324,914	+		PFLU_RS28420	0.35	-2.8
6,324,959	+		PFLU_RS28420	0.41	-0.9
6,324,959	+		PFLU_RS28420	0.41	-1.1
6,324,959	+		PFLU_RS28420	0.41	-0.1
6,324,960	-		PFLU_RS28420	0.41	-0.6
6,324,960	-		PFLU_RS28420	0.41	-0.2
6,324,960	-		PFLU_RS28420	0.41	-2.2
6,325,009	+		PFLU_RS28420	0.47	-1.8
6,325,009	+		PFLU_RS28420	0.47	+0.4
6,325,009	+		PFLU_RS28420	0.47	-0.3
6,325,009	+		PFLU_RS28420	0.47	-2.0
6,325,009	+		PFLU_RS28420	0.47	-2.5
6,325,009	+		PFLU_RS28420	0.47	-3.2
6,325,009	+		PFLU_RS28420	0.47	-0.7
6,325,009	+		PFLU_RS28420	0.47	-1.3
6,325,010	-		PFLU_RS28420	0.47	+0.3
6,325,010	-		PFLU_RS28420	0.47	-0.8
6,325,180	+		PFLU_RS28420	0.69	-0.6
6,325,181	-		PFLU_RS28420	0.69	-1.3
6,325,211	-		PFLU_RS28420	0.73	-0.3
6,325,211	-		PFLU_RS28420	0.73	-0.9
6,325,345	+		PFLU_RS28420	0.90	-1.0
6,325,345	+		PFLU_RS28420	0.90	-1.3
6,325,346	-		PFLU_RS28420	0.90	-0.4
6,325,378	+				-2.0
6,325,378	+				+0.0
6,325,378	+				-1.6
6,325,378	+				-1.1
6,325,379	-				-0.8
6,325,379	-				-0.1
6,325,379	-				-1.0
6,325,379	-				-0.2
6,325,379	-				-0.6
6,325,382	+				-0.4
6,325,382	+				-0.1
6,325,382	+				-2.0
6,325,382	+				-0.7
6,325,383	-				-1.2
6,325,383	-				-1.8
6,325,383	-				+0.0
6,325,383	-				-0.9
6,325,383	-				+2.4
6,325,717	+				+0.8
6,325,870	+		PFLU_RS28430	0.31	+0.6
6,325,870	+		PFLU_RS28430	0.31	-0.4
6,325,870	+		PFLU_RS28430	0.31	-0.3
6,325,870	+		PFLU_RS28430	0.31	-1.1
6,325,870	+		PFLU_RS28430	0.31	-0.3
6,325,870	+		PFLU_RS28430	0.31	+1.2
6,325,870	+		PFLU_RS28430	0.31	+0.8
6,325,870	+		PFLU_RS28430	0.31	+0.6
6,325,870	+		PFLU_RS28430	0.31	-0.0
6,325,870	+		PFLU_RS28430	0.31	+0.3
6,325,870	+		PFLU_RS28430	0.31	+0.4
6,325,870	+		PFLU_RS28430	0.31	+0.8
6,325,870	+		PFLU_RS28430	0.31	-1.2
6,325,870	+		PFLU_RS28430	0.31	+2.8
6,325,870	+		PFLU_RS28430	0.31	-0.1
6,325,870	+		PFLU_RS28430	0.31	+0.0
6,325,870	+		PFLU_RS28430	0.31	+0.0
6,325,870	+		PFLU_RS28430	0.31	-1.0
6,325,871	-		PFLU_RS28430	0.31	-0.5
6,325,871	-		PFLU_RS28430	0.31	+1.2
6,325,871	-		PFLU_RS28430	0.31	-0.1
6,325,871	-		PFLU_RS28430	0.31	+0.1
6,325,871	-		PFLU_RS28430	0.31	+0.0
6,325,871	-		PFLU_RS28430	0.31	-1.0
6,325,871	-		PFLU_RS28430	0.31	+1.8
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-0.8
6,325,871	-		PFLU_RS28430	0.31	+0.1
6,325,871	-		PFLU_RS28430	0.31	-0.9
6,325,871	-		PFLU_RS28430	0.31	+0.5
6,325,871	-		PFLU_RS28430	0.31	+0.8
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	+0.1
6,325,871	-		PFLU_RS28430	0.31	-0.2
6,325,871	-		PFLU_RS28430	0.31	+1.3
6,325,871	-		PFLU_RS28430	0.31	+1.4
6,325,871	-		PFLU_RS28430	0.31	-1.1
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	+0.8
6,325,871	-		PFLU_RS28430	0.31	+0.8
6,325,871	-		PFLU_RS28430	0.31	-0.0
6,325,871	-		PFLU_RS28430	0.31	+0.6
6,325,871	-		PFLU_RS28430	0.31	+1.0
6,325,871	-		PFLU_RS28430	0.31	+1.8
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-0.9
6,325,871	-		PFLU_RS28430	0.31	+0.0
6,325,943	+		PFLU_RS28430	0.51	+1.1
6,325,944	-		PFLU_RS28430	0.51	+0.8
6,325,944	-		PFLU_RS28430	0.51	-0.2
6,325,944	-		PFLU_RS28430	0.51	-0.2
6,325,944	-		PFLU_RS28430	0.51	-0.9
6,325,982	+		PFLU_RS28430	0.61	+0.6
6,325,982	+		PFLU_RS28430	0.61	+0.1
6,325,982	+		PFLU_RS28430	0.61	-0.5
6,325,982	+		PFLU_RS28430	0.61	-0.1
6,325,982	+		PFLU_RS28430	0.61	+0.5
6,325,982	+		PFLU_RS28430	0.61	-1.5
6,325,982	+		PFLU_RS28430	0.61	+0.7
6,325,982	+		PFLU_RS28430	0.61	-0.0
6,325,982	+		PFLU_RS28430	0.61	-0.9
6,325,982	+		PFLU_RS28430	0.61	-0.6
6,325,982	+		PFLU_RS28430	0.61	+0.6
6,325,982	+		PFLU_RS28430	0.61	-0.6
6,325,982	+		PFLU_RS28430	0.61	+0.1
6,325,982	+		PFLU_RS28430	0.61	-0.2
6,325,982	+		PFLU_RS28430	0.61	+1.5
6,325,982	+		PFLU_RS28430	0.61	+0.4
6,325,982	+		PFLU_RS28430	0.61	+0.0
6,325,982	+		PFLU_RS28430	0.61	+0.9
6,325,982	+		PFLU_RS28430	0.61	-0.0
6,325,982	+		PFLU_RS28430	0.61	-1.0
6,325,982	+		PFLU_RS28430	0.61	-1.8
6,325,982	+		PFLU_RS28430	0.61	+0.5
6,325,982	+		PFLU_RS28430	0.61	-0.1
6,325,982	+		PFLU_RS28430	0.61	-0.0
6,325,982	+		PFLU_RS28430	0.61	-1.3
6,325,982	+		PFLU_RS28430	0.61	+1.4
6,325,982	+		PFLU_RS28430	0.61	-0.7
6,325,982	+		PFLU_RS28430	0.61	+1.1
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	-1.9
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	+0.6
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	-0.0
6,325,983	-		PFLU_RS28430	0.61	+0.5
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	+0.4
6,325,983	-		PFLU_RS28430	0.61	+1.8
6,325,983	-		PFLU_RS28430	0.61	+0.5
6,325,983	-		PFLU_RS28430	0.61	+0.1
6,325,983	-		PFLU_RS28430	0.61	-0.9
6,325,983	-		PFLU_RS28430	0.61	-0.1
6,325,983	-		PFLU_RS28430	0.61	-0.1
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	+0.4
6,325,983	-		PFLU_RS28430	0.61	-0.5
6,325,983	-		PFLU_RS28430	0.61	+0.8
6,325,983	-		PFLU_RS28430	0.61	-0.8
6,325,983	-		PFLU_RS28430	0.61	-0.5
6,325,983	-		PFLU_RS28430	0.61	-0.2
6,325,983	-		PFLU_RS28430	0.61	+1.5
6,325,983	-		PFLU_RS28430	0.61	-1.3
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,983	-		PFLU_RS28430	0.61	-1.6
6,325,983	-		PFLU_RS28430	0.61	+0.4
6,325,983	-		PFLU_RS28430	0.61	+0.4
6,325,983	-		PFLU_RS28430	0.61	+0.6
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,983	-		PFLU_RS28430	0.61	-1.6
6,325,983	-		PFLU_RS28430	0.61	-0.0
6,325,986	+		PFLU_RS28430	0.62	+2.8
6,325,986	+		PFLU_RS28430	0.62	+0.8
6,325,986	+		PFLU_RS28430	0.62	+0.5
6,325,986	+		PFLU_RS28430	0.62	-0.9
6,325,986	+		PFLU_RS28430	0.62	-0.6
6,325,986	+		PFLU_RS28430	0.62	+0.8
6,325,986	+		PFLU_RS28430	0.62	+0.2
6,325,986	+		PFLU_RS28430	0.62	-0.9
6,325,986	+		PFLU_RS28430	0.62	+0.4
6,325,986	+		PFLU_RS28430	0.62	-0.7
6,325,986	+		PFLU_RS28430	0.62	+0.1
6,325,987	-		PFLU_RS28430	0.62	+0.3
6,325,987	-		PFLU_RS28430	0.62	-1.3
6,325,987	-		PFLU_RS28430	0.62	+0.2
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