Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20510

Experiment: malate (C) and Ammonium chloride (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with TAPS; with PEG
4,617,238	-				+0.2
4,617,394	+				+0.0
4,617,394	+				-0.9
4,617,460	+				+0.4
4,617,460	+				+0.1
4,617,461	-				+0.9
4,617,461	-				-0.5
4,617,461	-				+1.3
4,617,461	-				+0.3
4,617,469	+				+0.0
4,617,469	+				-0.7
4,617,469	+				-1.3
4,617,470	-				-1.6
4,617,470	-				+0.1
4,617,470	-				+0.9
4,617,470	-				+0.0
4,617,757	+		PFLU_RS20505	0.39	+0.0
4,617,835	+		PFLU_RS20505	0.49	-0.1
4,617,835	+		PFLU_RS20505	0.49	+1.9
4,617,835	+		PFLU_RS20505	0.49	+0.2
4,617,836	-		PFLU_RS20505	0.49	-0.6
4,617,858	+		PFLU_RS20505	0.52	-1.7
4,617,858	+		PFLU_RS20505	0.52	+1.1
4,617,929	+		PFLU_RS20505	0.61	+0.1
4,617,929	+		PFLU_RS20505	0.61	+0.5
4,617,929	+		PFLU_RS20505	0.61	-0.2
4,617,929	+		PFLU_RS20505	0.61	+0.1
4,617,930	-		PFLU_RS20505	0.62	-1.4
4,617,930	-		PFLU_RS20505	0.62	-0.5
4,617,930	-		PFLU_RS20505	0.62	+0.6
4,617,930	-		PFLU_RS20505	0.62	+0.6
4,617,930	-		PFLU_RS20505	0.62	+0.4
4,617,930	-		PFLU_RS20505	0.62	+0.2
4,617,930	-		PFLU_RS20505	0.62	+0.6
4,617,930	-		PFLU_RS20505	0.62	-0.0
4,617,930	-		PFLU_RS20505	0.62	-0.1
4,617,993	+		PFLU_RS20505	0.70	+0.6
4,617,993	+		PFLU_RS20505	0.70	+0.2
4,617,993	+		PFLU_RS20505	0.70	-0.3
4,617,994	-		PFLU_RS20505	0.70	+1.0
4,617,994	-		PFLU_RS20505	0.70	+0.0
4,617,994	-		PFLU_RS20505	0.70	+0.3
4,617,994	-		PFLU_RS20505	0.70	-0.0
4,618,047	-		PFLU_RS20505	0.77	+0.4
4,618,047	-		PFLU_RS20505	0.77	-0.4
4,618,161	+				-0.9
4,618,162	-				-0.0
4,618,162	-				-0.7
4,618,162	-				-1.3
4,618,162	-				+0.4
4,618,162	-				-0.1
4,618,203	-				-0.8
4,618,385	-		PFLU_RS20510	0.12	-2.2
4,618,399	+		PFLU_RS20510	0.14	-0.7
4,618,400	-		PFLU_RS20510	0.14	-0.8
4,618,420	+		PFLU_RS20510	0.15	-0.3
4,618,420	+		PFLU_RS20510	0.15	-2.5
4,618,421	-		PFLU_RS20510	0.15	-1.6
4,618,557	+		PFLU_RS20510	0.27	-3.1
4,618,557	+		PFLU_RS20510	0.27	-2.1
4,618,558	-		PFLU_RS20510	0.27	-3.2
4,618,558	-		PFLU_RS20510	0.27	-2.2
4,619,022	+		PFLU_RS20510	0.65	-1.8
4,619,022	+		PFLU_RS20510	0.65	-2.5
4,619,022	+		PFLU_RS20510	0.65	-2.5
4,619,022	+		PFLU_RS20510	0.65	-1.1
4,619,022	+		PFLU_RS20510	0.65	-1.1
4,619,022	+		PFLU_RS20510	0.65	-3.3
4,619,023	-		PFLU_RS20510	0.65	-1.9
4,619,023	-		PFLU_RS20510	0.65	-1.8
4,619,023	-		PFLU_RS20510	0.65	-3.1
4,619,023	-		PFLU_RS20510	0.65	-3.4
4,619,023	-		PFLU_RS20510	0.65	-0.9
4,619,052	+		PFLU_RS20510	0.67	-2.4
4,619,052	+		PFLU_RS20510	0.67	-1.5
4,619,052	+		PFLU_RS20510	0.67	-0.6
4,619,052	+		PFLU_RS20510	0.67	-1.1
4,619,052	+		PFLU_RS20510	0.67	-2.5
4,619,053	-		PFLU_RS20510	0.67	-0.3
4,619,053	-		PFLU_RS20510	0.67	+0.4
4,619,053	-		PFLU_RS20510	0.67	-2.7
4,619,053	-		PFLU_RS20510	0.67	-2.6
4,619,236	+		PFLU_RS20510	0.83	-1.9
4,619,236	+		PFLU_RS20510	0.83	-1.8
4,619,236	+		PFLU_RS20510	0.83	-0.8
4,619,236	+		PFLU_RS20510	0.83	-3.3
4,619,236	+		PFLU_RS20510	0.83	-1.2
4,619,236	+		PFLU_RS20510	0.83	-2.5
4,619,236	+		PFLU_RS20510	0.83	-3.6
4,619,236	+		PFLU_RS20510	0.83	-2.2
4,619,236	+		PFLU_RS20510	0.83	-1.9
4,619,236	+		PFLU_RS20510	0.83	-0.3
4,619,236	+		PFLU_RS20510	0.83	-3.1
4,619,236	+		PFLU_RS20510	0.83	-1.7
4,619,236	+		PFLU_RS20510	0.83	-2.5
4,619,236	+		PFLU_RS20510	0.83	-1.5
4,619,236	+		PFLU_RS20510	0.83	-3.5
4,619,237	-		PFLU_RS20510	0.83	-2.9
4,619,237	-		PFLU_RS20510	0.83	-1.9
4,619,237	-		PFLU_RS20510	0.83	-1.1
4,619,237	-		PFLU_RS20510	0.83	-2.1
4,619,237	-		PFLU_RS20510	0.83	-3.5
4,619,237	-		PFLU_RS20510	0.83	-2.4
4,619,237	-		PFLU_RS20510	0.83	-1.9
4,619,237	-		PFLU_RS20510	0.83	-2.9
4,619,237	-		PFLU_RS20510	0.83	-1.9
4,619,237	-		PFLU_RS20510	0.83	-1.3
4,619,247	+		PFLU_RS20510	0.83	-2.9
4,619,247	+		PFLU_RS20510	0.83	-3.7
4,619,247	+		PFLU_RS20510	0.83	-3.5
4,619,247	+		PFLU_RS20510	0.83	-2.3
4,619,247	+		PFLU_RS20510	0.83	-1.8
4,619,248	-		PFLU_RS20510	0.84	-4.3
4,619,248	-		PFLU_RS20510	0.84	-3.2
4,619,248	-		PFLU_RS20510	0.84	+0.0
4,619,248	-		PFLU_RS20510	0.84	-4.5
4,619,310	+		PFLU_RS20510	0.89	-3.3
4,619,310	+		PFLU_RS20510	0.89	-1.4
4,619,310	+		PFLU_RS20510	0.89	-3.8
4,619,310	+		PFLU_RS20510	0.89	-1.2
4,619,310	+		PFLU_RS20510	0.89	-3.1
4,619,310	+		PFLU_RS20510	0.89	-2.9
4,619,310	+		PFLU_RS20510	0.89	-2.9
4,619,310	+		PFLU_RS20510	0.89	-1.8
4,619,310	+		PFLU_RS20510	0.89	-2.1
4,619,310	+		PFLU_RS20510	0.89	-3.2
4,619,310	+		PFLU_RS20510	0.89	-1.9
4,619,310	+		PFLU_RS20510	0.89	-3.8
4,619,310	+		PFLU_RS20510	0.89	+1.7
4,619,310	+		PFLU_RS20510	0.89	-1.6
4,619,310	+		PFLU_RS20510	0.89	-1.5
4,619,310	+		PFLU_RS20510	0.89	-1.5
4,619,310	+		PFLU_RS20510	0.89	-2.6
4,619,310	+		PFLU_RS20510	0.89	-0.9
4,619,310	+		PFLU_RS20510	0.89	-0.6
4,619,310	+		PFLU_RS20510	0.89	-3.9
4,619,310	+		PFLU_RS20510	0.89	-0.1
4,619,310	+		PFLU_RS20510	0.89	-2.3
4,619,310	+		PFLU_RS20510	0.89	-2.5
4,619,310	+		PFLU_RS20510	0.89	-2.4
4,619,310	+		PFLU_RS20510	0.89	-2.2
4,619,310	+		PFLU_RS20510	0.89	-1.3
4,619,310	+		PFLU_RS20510	0.89	-1.1
4,619,310	+		PFLU_RS20510	0.89	-0.6
4,619,310	+		PFLU_RS20510	0.89	-3.5
4,619,310	+		PFLU_RS20510	0.89	-1.4
4,619,311	-		PFLU_RS20510	0.89	-3.1
4,619,311	-		PFLU_RS20510	0.89	-3.5
4,619,311	-		PFLU_RS20510	0.89	-2.8
4,619,311	-		PFLU_RS20510	0.89	-0.3
4,619,311	-		PFLU_RS20510	0.89	-1.0
4,619,311	-		PFLU_RS20510	0.89	-1.7
4,619,311	-		PFLU_RS20510	0.89	-3.1
4,619,311	-		PFLU_RS20510	0.89	-1.9
4,619,311	-		PFLU_RS20510	0.89	-2.5
4,619,311	-		PFLU_RS20510	0.89	-4.3
4,619,311	-		PFLU_RS20510	0.89	-2.8
4,619,311	-		PFLU_RS20510	0.89	-2.2
4,619,311	-		PFLU_RS20510	0.89	-2.6
4,619,396	+				-3.7
4,619,396	+				-3.6
4,619,396	+				-2.4
4,619,396	+				-3.4
4,619,396	+				-2.3
4,619,397	-				-2.6
4,619,397	-				-2.9
4,619,397	-				-2.8
4,619,459	+				-0.3
4,619,471	+				+1.3
4,619,471	+				+0.1
4,619,471	+				-0.7
4,619,471	+				-0.1
4,619,475	+				+0.3
4,619,475	+				-0.2
4,619,475	+				+1.8
4,619,475	+				+1.2
4,619,475	+				+0.1
4,619,475	+				-0.3
4,619,475	+				+0.5
4,619,475	+				+0.5
4,619,475	+				+0.5
4,619,475	+				+0.1
4,619,475	+				+0.3
4,619,475	+				+0.1
4,619,476	-				-0.1
4,619,476	-				+0.4
4,619,476	-				+0.7
4,619,476	-				-0.1
4,619,476	-				-0.3
4,619,476	-				+0.3
4,619,476	-				-0.0
4,619,476	-				-0.5
4,619,476	-				+0.5
4,619,480	+				+0.4
4,619,480	+				+0.1
4,619,480	+				-0.5
4,619,481	-				-1.0
4,619,522	+				+0.3
4,619,522	+				+0.0
4,619,522	+				+0.3
4,619,522	+				-1.3
4,619,522	+				-1.4
4,619,523	-				+0.7
4,619,523	-				+0.4
4,619,523	-				+0.6
4,619,523	-				-0.5
4,619,601	-				-1.5
4,619,627	+				-0.9
4,619,627	+				-0.9
4,619,627	+				-1.3
4,619,628	-				-1.5
4,619,628	-				-1.8
4,619,628	-				-1.5
4,619,628	-				-2.4
4,619,628	-				-0.9
4,619,715	-		PFLU_RS20515	0.13	-1.0
4,619,715	-		PFLU_RS20515	0.13	-1.3
4,619,807	+		PFLU_RS20515	0.20	-1.3
4,619,808	-		PFLU_RS20515	0.20	-1.1
4,619,808	-		PFLU_RS20515	0.20	-2.6
4,619,808	-		PFLU_RS20515	0.20	+1.1
4,619,849	+		PFLU_RS20515	0.22	+1.7
4,619,849	+		PFLU_RS20515	0.22	-0.9
4,619,850	-		PFLU_RS20515	0.22	-0.3
4,619,850	-		PFLU_RS20515	0.22	-2.3
4,619,850	-		PFLU_RS20515	0.22	-1.8
4,619,850	-		PFLU_RS20515	0.22	-0.3
4,620,035	+		PFLU_RS20515	0.35	+0.7
4,620,035	+		PFLU_RS20515	0.35	-0.9
4,620,036	-		PFLU_RS20515	0.35	-2.3
4,620,206	+		PFLU_RS20515	0.46	+1.7
4,620,206	+		PFLU_RS20515	0.46	-0.3
4,620,207	-		PFLU_RS20515	0.46	-0.8
4,620,248	+		PFLU_RS20515	0.49	-0.9
4,620,329	+		PFLU_RS20515	0.54	+0.7
4,620,329	+		PFLU_RS20515	0.54	-1.5
4,620,329	+		PFLU_RS20515	0.54	-1.3
4,620,329	+		PFLU_RS20515	0.54	-2.0
4,620,330	-		PFLU_RS20515	0.54	+0.1
4,620,330	-		PFLU_RS20515	0.54	-2.4
4,620,330	-		PFLU_RS20515	0.54	-0.6
4,620,330	-		PFLU_RS20515	0.54	-1.1
4,620,330	-		PFLU_RS20515	0.54	-1.1
4,620,410	+		PFLU_RS20515	0.60	-1.6
4,620,410	+		PFLU_RS20515	0.60	-0.9
4,620,411	-		PFLU_RS20515	0.60	-1.3
4,620,411	-		PFLU_RS20515	0.60	-2.4
4,620,411	-		PFLU_RS20515	0.60	-1.1
4,620,411	-		PFLU_RS20515	0.60	+0.7