Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03258 and H281DRAFT_03259 are separated by 219 nucleotides H281DRAFT_03259 and H281DRAFT_03260 are separated by 18 nucleotides H281DRAFT_03260 and H281DRAFT_03261 are separated by 132 nucleotides
H281DRAFT_03258: H281DRAFT_03258 - 5-carboxy-2-oxohept-3-enedioate decarboxylase HpaG1 subunit (EC 4.1.1.68), at 314,276 to 315,049
_03258
H281DRAFT_03259: H281DRAFT_03259 - transcriptional regulator, MarR family, at 315,269 to 315,649
_03259
H281DRAFT_03260: H281DRAFT_03260 - D-serine deaminase, pyridoxal phosphate-dependent, at 315,668 to 316,810
_03260
H281DRAFT_03261: H281DRAFT_03261 - transcriptional regulator, LysR family, at 316,943 to 317,854
_03261
Position (kb) 315
316
317 Strain fitness (log2 ratio) -2
-1
0
1 at 314.747 kb on + strand, within H281DRAFT_03258 at 314.824 kb on - strand, within H281DRAFT_03258 at 315.197 kb on - strand at 315.726 kb on + strand at 316.108 kb on - strand, within H281DRAFT_03260 at 316.424 kb on + strand, within H281DRAFT_03260 at 316.425 kb on - strand, within H281DRAFT_03260 at 316.691 kb on + strand, within H281DRAFT_03260 at 316.691 kb on + strand, within H281DRAFT_03260 at 316.691 kb on + strand, within H281DRAFT_03260 at 316.884 kb on + strand at 317.668 kb on + strand, within H281DRAFT_03261
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 314,747 + H281DRAFT_03258 0.61 -1.6 314,824 - H281DRAFT_03258 0.71 +0.2 315,197 - +0.6 315,726 + +0.5 316,108 - H281DRAFT_03260 0.38 -1.0 316,424 + H281DRAFT_03260 0.66 +0.1 316,425 - H281DRAFT_03260 0.66 +0.3 316,691 + H281DRAFT_03260 0.90 -2.4 316,691 + H281DRAFT_03260 0.90 -0.5 316,691 + H281DRAFT_03260 0.90 -0.7 316,884 + -0.7 317,668 + H281DRAFT_03261 0.79 +1.6
Or see this region's nucleotide sequence