Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09690

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c09680 and PGA1_c09690 are separated by 449 nucleotidesPGA1_c09690 and PGA1_c09700 are separated by 214 nucleotides PGA1_c09680: PGA1_c09680 - celldivision protein FtsA, at 992,046 to 993,380 _c09680 PGA1_c09690: PGA1_c09690 - cell division protein FtsZ, at 993,830 to 995,623 _c09690 PGA1_c09700: PGA1_c09700 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC, at 995,838 to 996,773 _c09700 Position (kb) 993 994 995 996Strain fitness (log2 ratio) -2 -1 0 1at 993.397 kb on + strandat 993.398 kb on + strandat 993.398 kb on + strandat 993.399 kb on + strandat 993.399 kb on + strandat 993.399 kb on + strandat 993.407 kb on - strandat 993.425 kb on + strandat 993.433 kb on - strandat 993.451 kb on + strandat 993.459 kb on - strandat 993.551 kb on + strandat 993.639 kb on - strandat 993.641 kb on + strandat 993.642 kb on + strandat 995.690 kb on + strandat 995.698 kb on - strandat 995.720 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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993,397 + +0.1
993,398 + -0.2
993,398 + +0.4
993,399 + +0.1
993,399 + +0.2
993,399 + +0.1
993,407 - +0.1
993,425 + -2.4
993,433 - +0.4
993,451 + -0.2
993,459 - +0.7
993,551 + -1.9
993,639 - +0.2
993,641 + -0.9
993,642 + -0.6
995,690 + -0.9
995,698 - -1.4
995,720 + +1.2

Or see this region's nucleotide sequence