Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c08160

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c08140 and PGA1_c08150 are separated by 3 nucleotidesPGA1_c08150 and PGA1_c08160 are separated by 1 nucleotidesPGA1_c08160 and PGA1_c08170 overlap by 4 nucleotides PGA1_c08140: PGA1_c08140 - precorrin-2 C(20)-methyltransferase CobI, at 842,259 to 842,987 _c08140 PGA1_c08150: PGA1_c08150 - precorrin-8X methylmutase CobH, at 842,991 to 843,620 _c08150 PGA1_c08160: PGA1_c08160 - putative precorrin-3B synthase, at 843,622 to 844,800 _c08160 PGA1_c08170: PGA1_c08170 - aerobic cobaltochelatase subunit CobN, at 844,797 to 848,042 _c08170 Position (kb) 843 844 845Strain fitness (log2 ratio) -2 -1 0 1at 843.635 kb on + strandat 843.675 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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843,635 + -1.9
843,675 + -1.4

Or see this region's nucleotide sequence