Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36510

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c36500 and PGA1_c36510 are separated by 287 nucleotides PGA1_c36500: PGA1_c36500 - enoyl-CoA hydratase/isomerase, at 3,820,010 to 3,820,786 _c36500 PGA1_c36510: PGA1_c36510 - 30S ribosomal protein S20, at 3,821,074 to 3,821,337 _c36510 Position (kb) 3821 3822Strain fitness (log2 ratio) -1 0 1at 3820.787 kb on + strandat 3820.799 kb on - strandat 3820.815 kb on - strandat 3820.815 kb on - strandat 3820.826 kb on + strandat 3820.873 kb on + strandat 3820.886 kb on - strandat 3820.899 kb on - strandat 3820.925 kb on + strandat 3821.390 kb on + strandat 3821.478 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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3,820,787 + -0.2
3,820,799 - +1.0
3,820,815 - -0.6
3,820,815 - -1.0
3,820,826 + +0.0
3,820,873 + +0.0
3,820,886 - +0.6
3,820,899 - -0.5
3,820,925 + +0.3
3,821,390 + -0.8
3,821,478 - -0.9

Or see this region's nucleotide sequence