Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34630

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c34620 and PGA1_c34630 are separated by 8 nucleotidesPGA1_c34630 and PGA1_c34640 are separated by 26 nucleotides PGA1_c34620: PGA1_c34620 - translation initiation factor IF-2, at 3,632,524 to 3,635,007 _c34620 PGA1_c34630: PGA1_c34630 - Predicted nucleic-acid-binding protein implicated in transcription termination, at 3,635,016 to 3,635,636 _c34630 PGA1_c34640: PGA1_c34640 - transcription elongation protein NusA, at 3,635,663 to 3,637,288 _c34640 Position (kb) 3635 3636Strain fitness (log2 ratio) -2 -1 0 1at 3635.058 kb on + strandat 3635.680 kb on - strandat 3635.742 kb on + strandat 3635.750 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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3,635,058 + -0.3
3,635,680 - -1.0
3,635,742 + +0.0
3,635,750 - -1.8

Or see this region's nucleotide sequence