Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17710

Experiment: DinoMM minimal media with L-Arginine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DinoMM minimal media with L-Arginine
1,853,127	+				+0.7
1,853,150	-				+0.5
1,853,215	-		PGA1_c17700	0.20	-1.0
1,853,215	-		PGA1_c17700	0.20	+2.0
1,853,215	-		PGA1_c17700	0.20	+1.2
1,853,249	-		PGA1_c17700	0.32	-0.9
1,853,300	+		PGA1_c17700	0.49	+0.4
1,853,313	-		PGA1_c17700	0.53	+0.3
1,853,436	+				-0.0
1,853,480	-				+0.6
1,853,530	-				+0.2
1,853,541	+				+0.1
1,853,601	-				-0.1
1,853,601	-				+0.3
1,853,624	-				+0.9
1,853,650	+				+0.1
1,853,775	+				+0.0
1,853,777	+				+0.5
1,853,783	-				-0.9
1,853,785	+				-0.4
1,853,817	+				-0.6
1,853,835	-				-0.9
1,853,835	-				-0.4
1,853,855	+				-0.1
1,853,874	+		PGA1_c17710	0.10	+1.7
1,853,874	+				-0.2
1,853,882	-		PGA1_c17710	0.11	+1.1
1,853,945	-		PGA1_c17710	0.12	+1.0
1,853,978	+		PGA1_c17710	0.13	+1.6
1,853,982	+		PGA1_c17710	0.13	+1.7
1,853,983	+		PGA1_c17710	0.13	+0.7
1,854,041	-		PGA1_c17710	0.15	+1.0
1,854,068	-		PGA1_c17710	0.15	+0.3
1,854,104	-		PGA1_c17710	0.16	+0.3
1,854,114	+		PGA1_c17710	0.16	-0.3
1,854,114	+		PGA1_c17710	0.16	-0.2
1,854,122	-		PGA1_c17710	0.17	-0.1
1,854,299	-		PGA1_c17710	0.21	-0.5
1,854,299	-		PGA1_c17710	0.21	-1.8
1,854,305	+		PGA1_c17710	0.21	+2.7
1,854,310	+		PGA1_c17710	0.21	+0.8
1,854,382	-		PGA1_c17710	0.23	+0.4
1,854,405	+		PGA1_c17710	0.24	-0.2
1,854,440	-		PGA1_c17710	0.25	+0.4
1,854,443	+		PGA1_c17710	0.25	-0.4
1,854,443	+		PGA1_c17710	0.25	-1.1
1,854,443	+		PGA1_c17710	0.25	-1.6
1,854,443	+		PGA1_c17710	0.25	-1.5
1,854,443	+		PGA1_c17710	0.25	+0.8
1,854,449	+		PGA1_c17710	0.25	-0.3
1,854,451	-		PGA1_c17710	0.25	+0.7
1,854,451	-		PGA1_c17710	0.25	+1.1
1,854,457	-		PGA1_c17710	0.25	+0.4
1,854,512	-		PGA1_c17710	0.26	+0.2
1,854,515	-		PGA1_c17710	0.26	+1.4
1,854,558	-		PGA1_c17710	0.28	+1.8
1,854,569	-		PGA1_c17710	0.28	+0.4
1,854,569	-		PGA1_c17710	0.28	+0.6
1,854,696	+		PGA1_c17710	0.31	-0.2
1,854,715	+		PGA1_c17710	0.32	-0.3
1,854,747	+		PGA1_c17710	0.32	-0.0
1,854,755	-		PGA1_c17710	0.33	-0.4
1,854,755	-		PGA1_c17710	0.33	-1.8
1,854,841	-		PGA1_c17710	0.35	+0.2
1,854,870	-		PGA1_c17710	0.35	+0.8
1,854,893	-		PGA1_c17710	0.36	+0.4
1,854,894	+		PGA1_c17710	0.36	+0.1
1,854,910	-		PGA1_c17710	0.36	-0.2
1,854,940	+		PGA1_c17710	0.37	-0.3
1,855,003	+		PGA1_c17710	0.39	+1.0
1,855,048	+		PGA1_c17710	0.40	+1.1
1,855,066	-		PGA1_c17710	0.40	+0.1
1,855,100	-		PGA1_c17710	0.41	+0.1
1,855,100	-		PGA1_c17710	0.41	-1.8
1,855,111	-		PGA1_c17710	0.41	-0.6
1,855,111	-		PGA1_c17710	0.41	+0.6
1,855,111	-		PGA1_c17710	0.41	-0.3
1,855,127	-		PGA1_c17710	0.42	+1.4
1,855,314	+		PGA1_c17710	0.47	-1.1
1,855,314	+		PGA1_c17710	0.47	-0.3
1,855,314	+		PGA1_c17710	0.47	+0.8
1,855,322	-		PGA1_c17710	0.47	-0.7
1,855,322	-		PGA1_c17710	0.47	+1.7
1,855,322	-		PGA1_c17710	0.47	-1.4
1,855,322	-		PGA1_c17710	0.47	+0.9
1,855,322	-		PGA1_c17710	0.47	-0.2
1,855,324	+		PGA1_c17710	0.47	-0.5
1,855,332	-		PGA1_c17710	0.47	+0.9
1,855,347	-		PGA1_c17710	0.47	+0.1
1,855,379	-		PGA1_c17710	0.48	+0.2
1,855,416	+		PGA1_c17710	0.49	-0.9
1,855,457	+		PGA1_c17710	0.50	-0.2
1,855,470	-		PGA1_c17710	0.51	+0.4
1,855,470	-		PGA1_c17710	0.51	+0.0
1,855,500	+		PGA1_c17710	0.51	-0.6
1,855,567	+		PGA1_c17710	0.53	+0.3
1,855,582	+		PGA1_c17710	0.53	+0.8
1,855,660	-		PGA1_c17710	0.55	-0.8
1,855,744	-		PGA1_c17710	0.57	+1.1
1,855,820	+		PGA1_c17710	0.59	+0.1
1,855,833	+		PGA1_c17710	0.60	+0.2
1,855,867	+		PGA1_c17710	0.61	+1.0
1,855,938	+		PGA1_c17710	0.62	+0.4
1,855,938	+		PGA1_c17710	0.62	+1.2
1,855,946	-		PGA1_c17710	0.63	+0.6
1,855,998	+		PGA1_c17710	0.64	-0.9
1,856,027	-		PGA1_c17710	0.65	+0.3
1,856,034	+		PGA1_c17710	0.65	-0.9
1,856,034	+		PGA1_c17710	0.65	+1.3
1,856,042	-		PGA1_c17710	0.65	+0.0
1,856,042	-		PGA1_c17710	0.65	-0.2
1,856,042	-		PGA1_c17710	0.65	+0.7
1,856,057	-		PGA1_c17710	0.65	-0.6
1,856,066	+		PGA1_c17710	0.66	+0.8
1,856,241	+		PGA1_c17710	0.70	+1.7
1,856,260	+		PGA1_c17710	0.70	+0.4
1,856,331	+		PGA1_c17710	0.72	+0.4
1,856,364	+		PGA1_c17710	0.73	+0.3
1,856,436	+		PGA1_c17710	0.75	+1.8
1,856,522	+		PGA1_c17710	0.77	+0.0
1,856,523	+		PGA1_c17710	0.77	-0.2
1,856,537	+		PGA1_c17710	0.77	+0.7
1,856,537	+		PGA1_c17710	0.77	+0.7
1,856,537	+		PGA1_c17710	0.77	+0.4
1,856,545	-		PGA1_c17710	0.78	+1.0
1,856,546	+		PGA1_c17710	0.78	+0.9
1,856,657	-		PGA1_c17710	0.80	-1.6
1,856,657	-		PGA1_c17710	0.80	-1.8
1,856,675	+		PGA1_c17710	0.81	+2.8
1,856,683	-		PGA1_c17710	0.81	+0.5
1,856,683	-		PGA1_c17710	0.81	+0.4
1,856,688	-		PGA1_c17710	0.81	-0.5
1,856,693	-		PGA1_c17710	0.81	-1.1
1,856,693	-		PGA1_c17710	0.81	+0.1
1,856,758	+		PGA1_c17710	0.83	+0.9
1,856,813	+		PGA1_c17710	0.84	-0.5
1,856,831	-		PGA1_c17710	0.85	-0.4
1,856,894	-		PGA1_c17710	0.86	+0.4
1,856,905	+		PGA1_c17710	0.87	+0.2
1,856,958	+		PGA1_c17710	0.88	+1.4
1,857,013	-		PGA1_c17710	0.89	+0.4
1,857,020	+		PGA1_c17710	0.90	-0.5
1,857,020	+		PGA1_c17710	0.90	+0.6
1,857,020	+		PGA1_c17710	0.90	-0.5
1,857,028	-		PGA1_c17710	0.90	-0.9
1,857,028	-		PGA1_c17710	0.90	+1.1
1,857,028	-		PGA1_c17710	0.90	-0.7
1,857,056	-				+0.3
1,857,099	+				+0.3
1,857,107	-				+0.2
1,857,107	-				-1.4
1,857,191	+				-1.8
1,857,203	+				-1.0
1,857,276	-				-0.4
1,857,277	-				-1.7
1,857,376	+				-1.6
1,857,429	+				+1.4
1,857,433	+				+0.4
1,857,443	-				-0.1
1,857,446	-				-0.8
1,857,521	+		PGA1_c17720	0.20	+0.1
1,857,653	+		PGA1_c17720	0.49	-0.8
1,857,715	-		PGA1_c17720	0.63	-0.7
1,857,729	+		PGA1_c17720	0.66	-1.2
1,857,737	-		PGA1_c17720	0.68	-0.2
1,857,761	+		PGA1_c17720	0.73	-0.8
1,857,775	+		PGA1_c17720	0.76	-1.7
1,857,793	-		PGA1_c17720	0.80	-1.9
1,857,900	+				-0.8
1,858,037	+		PGA1_c17730	0.15	+1.2
1,858,076	-		PGA1_c17730	0.19	-1.0
1,858,195	+		PGA1_c17730	0.31	-0.0
1,858,203	-		PGA1_c17730	0.32	-0.0
1,858,204	-		PGA1_c17730	0.32	+0.7
1,858,211	+		PGA1_c17730	0.33	-0.5
1,858,217	-		PGA1_c17730	0.33	-0.5
1,858,217	-		PGA1_c17730	0.33	-0.6
1,858,219	-		PGA1_c17730	0.34	-2.6
1,858,280	+				+0.9
1,858,312	+		PGA1_c17730	0.43	-1.9
1,858,320	-		PGA1_c17730	0.44	-0.6
1,858,320	-		PGA1_c17730	0.44	+0.5
1,858,328	-		PGA1_c17730	0.45	-2.1