Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c01410

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c01400 and PGA1_c01410 are separated by 388 nucleotidesPGA1_c01410 and PGA1_c01420 are separated by 81 nucleotidesPGA1_c01420 and PGA1_c01430 are separated by 274 nucleotides PGA1_c01400: PGA1_c01400 - 50S ribosomal protein L1, at 131,345 to 132,043 _c01400 PGA1_c01410: PGA1_c01410 - 50S ribosomal protein L10, at 132,432 to 133,007 _c01410 PGA1_c01420: PGA1_c01420 - 50S ribosomal protein L7/L12, at 133,089 to 133,463 _c01420 PGA1_c01430: PGA1_c01430 - DNA-directed RNA polymerase subunit beta, at 133,738 to 137,874 _c01430 Position (kb) 132 133 134Strain fitness (log2 ratio) -1 0 1 2at 132.188 kb on + strandat 132.193 kb on + strandat 132.193 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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132,188 + +1.8
132,193 + -1.3
132,193 + +0.3

Or see this region's nucleotide sequence