Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24450

Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24440 and BWI76_RS24445 are separated by 378 nucleotidesBWI76_RS24445 and BWI76_RS24450 are separated by 54 nucleotidesBWI76_RS24450 and BWI76_RS24455 are separated by 273 nucleotides BWI76_RS24440: BWI76_RS24440 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 5,096,033 to 5,096,686 _RS24440 BWI76_RS24445: BWI76_RS24445 - hypothetical protein, at 5,097,065 to 5,097,346 _RS24445 BWI76_RS24450: BWI76_RS24450 - glycogen synthase, at 5,097,401 to 5,097,610 _RS24450 BWI76_RS24455: BWI76_RS24455 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase, at 5,097,884 to 5,099,317 _RS24455 Position (kb) 5097 5098Strain fitness (log2 ratio) -2 -1 0 1 2at 5096.969 kb on + strandat 5097.035 kb on + strandat 5097.035 kb on + strandat 5097.035 kb on + strandat 5097.040 kb on + strandat 5097.043 kb on - strandat 5097.050 kb on + strandat 5097.058 kb on - strandat 5097.418 kb on + strandat 5097.675 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
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5,096,969 + -2.0
5,097,035 + -1.7
5,097,035 + -0.1
5,097,035 + -0.2
5,097,040 + +0.7
5,097,043 - +1.5
5,097,050 + +2.0
5,097,058 - +0.5
5,097,418 + +0.3
5,097,675 + -0.8

Or see this region's nucleotide sequence