Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10420 and BWI76_RS10425 are separated by 43 nucleotides BWI76_RS10425 and BWI76_RS10430 are separated by 107 nucleotides BWI76_RS10430 and BWI76_RS10435 are separated by 44 nucleotides
BWI76_RS10420: BWI76_RS10420 - monooxygenase, at 2,203,362 to 2,204,390
_RS10420
BWI76_RS10425: BWI76_RS10425 - AIG2 family protein, at 2,204,434 to 2,204,769
_RS10425
BWI76_RS10430: BWI76_RS10430 - thiol:disulfide interchange protein DsbG, at 2,204,877 to 2,205,635
_RS10430
BWI76_RS10435: BWI76_RS10435 - suppressor for copper-sensitivity C, at 2,205,680 to 2,206,402
_RS10435
Position (kb)
2204
2205 Strain fitness (log2 ratio)
-1
0
1
2 at 2203.625 kb on + strand, within BWI76_RS10420 at 2203.633 kb on - strand, within BWI76_RS10420 at 2203.633 kb on - strand, within BWI76_RS10420 at 2203.672 kb on + strand, within BWI76_RS10420 at 2203.729 kb on + strand, within BWI76_RS10420 at 2203.880 kb on + strand, within BWI76_RS10420 at 2204.239 kb on - strand, within BWI76_RS10420 at 2204.329 kb on - strand at 2204.744 kb on - strand at 2205.247 kb on + strand, within BWI76_RS10430 at 2205.360 kb on + strand, within BWI76_RS10430 at 2205.445 kb on + strand, within BWI76_RS10430 at 2205.491 kb on - strand, within BWI76_RS10430 at 2205.589 kb on - strand at 2205.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM remove 2,203,625 + BWI76_RS10420 0.26 -0.3 2,203,633 - BWI76_RS10420 0.26 -0.1 2,203,633 - BWI76_RS10420 0.26 +0.9 2,203,672 + BWI76_RS10420 0.30 -0.7 2,203,729 + BWI76_RS10420 0.36 -0.4 2,203,880 + BWI76_RS10420 0.50 -0.1 2,204,239 - BWI76_RS10420 0.85 -0.2 2,204,329 - +2.0 2,204,744 - +1.4 2,205,247 + BWI76_RS10430 0.49 +0.3 2,205,360 + BWI76_RS10430 0.64 -0.5 2,205,445 + BWI76_RS10430 0.75 -0.5 2,205,491 - BWI76_RS10430 0.81 +0.6 2,205,589 - +1.4 2,205,739 - -0.1
Or see this region's nucleotide sequence