Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05375

Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS05365 and BWI76_RS05370 are separated by 188 nucleotidesBWI76_RS05370 and BWI76_RS05375 are separated by 105 nucleotidesBWI76_RS05375 and BWI76_RS05380 are separated by 53 nucleotides BWI76_RS05365: BWI76_RS05365 - D-methionine ABC transporter, ATP-binding protein, at 1,128,650 to 1,129,681 _RS05365 BWI76_RS05370: BWI76_RS05370 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 1,129,870 to 1,130,436 _RS05370 BWI76_RS05375: BWI76_RS05375 - hypothetical protein, at 1,130,542 to 1,130,747 _RS05375 BWI76_RS05380: BWI76_RS05380 - 16S ribosomal RNA, at 1,130,801 to 1,132,354 _RS05380 Position (kb) 1130 1131Strain fitness (log2 ratio) -1 0 1at 1129.555 kb on - strand, within BWI76_RS05365

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
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1,129,555 - BWI76_RS05365 0.88 +0.2

Or see this region's nucleotide sequence