Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03205 and BWI76_RS03210 are separated by 117 nucleotides BWI76_RS03210 and BWI76_RS03215 are separated by 258 nucleotides
BWI76_RS03205: BWI76_RS03205 - hypothetical protein, at 660,913 to 662,153
_RS03205
BWI76_RS03210: BWI76_RS03210 - integrase, at 662,271 to 662,372
_RS03210
BWI76_RS03215: BWI76_RS03215 - hypothetical protein, at 662,631 to 663,731
_RS03215
Position (kb) 662
663 Strain fitness (log2 ratio) -1
0
1 at 662.202 kb on + strand at 662.202 kb on + strand at 662.202 kb on + strand at 662.209 kb on + strand at 662.209 kb on + strand at 662.209 kb on + strand at 662.217 kb on - strand at 662.217 kb on - strand at 662.217 kb on - strand at 662.217 kb on - strand at 662.222 kb on - strand at 662.321 kb on + strand, within BWI76_RS03210 at 662.367 kb on + strand at 662.412 kb on + strand at 662.437 kb on - strand at 662.476 kb on + strand at 662.765 kb on + strand, within BWI76_RS03215 at 662.773 kb on + strand, within BWI76_RS03215 at 662.773 kb on + strand, within BWI76_RS03215 at 662.778 kb on + strand, within BWI76_RS03215 at 662.781 kb on - strand, within BWI76_RS03215 at 662.781 kb on - strand, within BWI76_RS03215 at 662.781 kb on - strand, within BWI76_RS03215 at 662.781 kb on - strand at 662.792 kb on + strand, within BWI76_RS03215 at 662.820 kb on - strand, within BWI76_RS03215 at 662.865 kb on - strand, within BWI76_RS03215 at 662.943 kb on + strand, within BWI76_RS03215 at 662.951 kb on - strand, within BWI76_RS03215 at 662.960 kb on + strand, within BWI76_RS03215 at 663.081 kb on - strand, within BWI76_RS03215 at 663.081 kb on - strand, within BWI76_RS03215 at 663.082 kb on - strand, within BWI76_RS03215 at 663.093 kb on - strand, within BWI76_RS03215 at 663.177 kb on + strand, within BWI76_RS03215 at 663.184 kb on + strand, within BWI76_RS03215 at 663.359 kb on + strand, within BWI76_RS03215
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM remove 662,202 + +0.5 662,202 + +0.5 662,202 + -0.2 662,209 + +0.3 662,209 + -0.9 662,209 + +0.8 662,217 - -0.1 662,217 - +0.8 662,217 - -1.1 662,217 - -0.1 662,222 - +0.1 662,321 + BWI76_RS03210 0.49 -1.1 662,367 + -0.6 662,412 + -0.4 662,437 - +0.0 662,476 + -0.4 662,765 + BWI76_RS03215 0.12 +0.2 662,773 + BWI76_RS03215 0.13 -0.2 662,773 + BWI76_RS03215 0.13 -0.2 662,778 + BWI76_RS03215 0.13 -0.0 662,781 - BWI76_RS03215 0.14 +0.3 662,781 - BWI76_RS03215 0.14 -0.1 662,781 - BWI76_RS03215 0.14 +0.5 662,781 - -0.4 662,792 + BWI76_RS03215 0.15 +0.1 662,820 - BWI76_RS03215 0.17 +0.0 662,865 - BWI76_RS03215 0.21 -0.7 662,943 + BWI76_RS03215 0.28 +0.2 662,951 - BWI76_RS03215 0.29 -1.0 662,960 + BWI76_RS03215 0.30 -0.5 663,081 - BWI76_RS03215 0.41 +0.5 663,081 - BWI76_RS03215 0.41 -0.2 663,082 - BWI76_RS03215 0.41 -0.4 663,093 - BWI76_RS03215 0.42 +1.5 663,177 + BWI76_RS03215 0.50 -0.1 663,184 + BWI76_RS03215 0.50 +0.1 663,359 + BWI76_RS03215 0.66 +0.2
Or see this region's nucleotide sequence