Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05525 and H281DRAFT_05526 are separated by 177 nucleotides H281DRAFT_05526 and H281DRAFT_05527 are separated by 278 nucleotides H281DRAFT_05527 and H281DRAFT_05528 are separated by 18 nucleotides
H281DRAFT_05525: H281DRAFT_05525 - Short-chain dehydrogenases of various substrate specificities, at 108,663 to 109,538
_05525
H281DRAFT_05526: H281DRAFT_05526 - DNA-binding transcriptional regulator, MerR family, at 109,716 to 110,063
_05526
H281DRAFT_05527: H281DRAFT_05527 - transcriptional regulator, TetR family, at 110,342 to 110,992
_05527
H281DRAFT_05528: H281DRAFT_05528 - hypothetical protein, at 111,011 to 111,364
_05528
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 108.744 kb on + strand at 108.763 kb on + strand, within H281DRAFT_05525 at 108.763 kb on + strand, within H281DRAFT_05525 at 108.764 kb on - strand, within H281DRAFT_05525 at 108.908 kb on + strand, within H281DRAFT_05525 at 108.908 kb on + strand, within H281DRAFT_05525 at 108.909 kb on - strand, within H281DRAFT_05525 at 108.909 kb on - strand, within H281DRAFT_05525 at 108.909 kb on - strand, within H281DRAFT_05525 at 108.916 kb on + strand, within H281DRAFT_05525 at 108.917 kb on - strand, within H281DRAFT_05525 at 109.067 kb on + strand, within H281DRAFT_05525 at 109.068 kb on - strand, within H281DRAFT_05525 at 109.068 kb on - strand, within H281DRAFT_05525 at 109.078 kb on + strand, within H281DRAFT_05525 at 109.079 kb on - strand, within H281DRAFT_05525 at 109.122 kb on + strand, within H281DRAFT_05525 at 109.123 kb on - strand, within H281DRAFT_05525 at 109.123 kb on - strand, within H281DRAFT_05525 at 109.123 kb on - strand, within H281DRAFT_05525 at 109.123 kb on - strand, within H281DRAFT_05525 at 109.123 kb on - strand, within H281DRAFT_05525 at 109.143 kb on - strand, within H281DRAFT_05525 at 109.385 kb on - strand, within H281DRAFT_05525 at 109.385 kb on - strand, within H281DRAFT_05525 at 109.509 kb on + strand at 109.530 kb on + strand at 109.530 kb on + strand at 109.531 kb on - strand at 109.538 kb on + strand at 109.539 kb on - strand at 109.584 kb on + strand at 109.584 kb on + strand at 109.585 kb on - strand at 109.585 kb on - strand at 109.773 kb on + strand, within H281DRAFT_05526 at 109.774 kb on - strand, within H281DRAFT_05526 at 109.774 kb on - strand, within H281DRAFT_05526 at 109.791 kb on - strand, within H281DRAFT_05526 at 109.828 kb on - strand, within H281DRAFT_05526 at 109.859 kb on + strand, within H281DRAFT_05526 at 109.860 kb on - strand, within H281DRAFT_05526 at 110.014 kb on + strand, within H281DRAFT_05526 at 110.062 kb on - strand at 110.150 kb on + strand at 110.168 kb on + strand at 110.181 kb on + strand at 110.182 kb on - strand at 110.182 kb on - strand at 110.306 kb on - strand at 110.313 kb on + strand at 110.314 kb on - strand at 110.344 kb on - strand at 110.388 kb on + strand at 110.388 kb on + strand at 110.388 kb on + strand at 110.388 kb on + strand at 110.388 kb on + strand at 110.388 kb on + strand at 110.388 kb on + strand at 110.389 kb on - strand at 110.785 kb on - strand, within H281DRAFT_05527 at 110.785 kb on - strand, within H281DRAFT_05527 at 110.809 kb on - strand, within H281DRAFT_05527 at 110.814 kb on + strand, within H281DRAFT_05527 at 110.831 kb on - strand, within H281DRAFT_05527 at 110.914 kb on + strand, within H281DRAFT_05527 at 111.022 kb on + strand at 111.022 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 108,744 + +0.8 108,763 + H281DRAFT_05525 0.11 -0.5 108,763 + H281DRAFT_05525 0.11 +0.4 108,764 - H281DRAFT_05525 0.12 +0.7 108,908 + H281DRAFT_05525 0.28 +0.7 108,908 + H281DRAFT_05525 0.28 +0.1 108,909 - H281DRAFT_05525 0.28 +0.1 108,909 - H281DRAFT_05525 0.28 +1.0 108,909 - H281DRAFT_05525 0.28 +0.5 108,916 + H281DRAFT_05525 0.29 +0.5 108,917 - H281DRAFT_05525 0.29 +1.0 109,067 + H281DRAFT_05525 0.46 -0.6 109,068 - H281DRAFT_05525 0.46 +0.4 109,068 - H281DRAFT_05525 0.46 +0.1 109,078 + H281DRAFT_05525 0.47 -0.4 109,079 - H281DRAFT_05525 0.47 +0.2 109,122 + H281DRAFT_05525 0.52 +0.0 109,123 - H281DRAFT_05525 0.53 +0.8 109,123 - H281DRAFT_05525 0.53 -0.6 109,123 - H281DRAFT_05525 0.53 +0.4 109,123 - H281DRAFT_05525 0.53 -0.2 109,123 - H281DRAFT_05525 0.53 +0.3 109,143 - H281DRAFT_05525 0.55 +0.5 109,385 - H281DRAFT_05525 0.82 +0.7 109,385 - H281DRAFT_05525 0.82 +0.0 109,509 + -0.7 109,530 + +2.2 109,530 + -0.2 109,531 - -0.0 109,538 + +0.4 109,539 - -0.1 109,584 + -0.3 109,584 + +0.5 109,585 - -0.3 109,585 - +0.3 109,773 + H281DRAFT_05526 0.16 -0.8 109,774 - H281DRAFT_05526 0.17 -0.1 109,774 - H281DRAFT_05526 0.17 +0.2 109,791 - H281DRAFT_05526 0.22 +1.1 109,828 - H281DRAFT_05526 0.32 +0.5 109,859 + H281DRAFT_05526 0.41 -0.0 109,860 - H281DRAFT_05526 0.41 +0.5 110,014 + H281DRAFT_05526 0.86 -0.7 110,062 - -1.0 110,150 + -0.6 110,168 + +0.4 110,181 + -0.0 110,182 - -0.0 110,182 - +1.2 110,306 - +0.2 110,313 + +0.1 110,314 - +0.4 110,344 - +0.1 110,388 + -0.5 110,388 + -1.2 110,388 + +0.1 110,388 + -0.3 110,388 + +2.0 110,388 + -1.1 110,388 + -0.8 110,389 - +1.2 110,785 - H281DRAFT_05527 0.68 -0.4 110,785 - H281DRAFT_05527 0.68 -0.2 110,809 - H281DRAFT_05527 0.72 -1.1 110,814 + H281DRAFT_05527 0.73 -0.3 110,831 - H281DRAFT_05527 0.75 -2.0 110,914 + H281DRAFT_05527 0.88 +0.6 111,022 + +0.9 111,022 + -0.2
Or see this region's nucleotide sequence