Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03434

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03434 and H281DRAFT_03435 are separated by 45 nucleotides H281DRAFT_03434: H281DRAFT_03434 - tyrosine-protein kinase Etk/Wzc, at 512,329 to 514,647 _03434 H281DRAFT_03435: H281DRAFT_03435 - Glycosyltransferase involved in cell wall bisynthesis, at 514,693 to 515,808 _03435 Position (kb) 512 513 514 515Strain fitness (log2 ratio) -1 0 1 2at 511.443 kb on - strandat 511.669 kb on + strandat 511.688 kb on + strandat 511.688 kb on + strandat 511.689 kb on - strandat 511.822 kb on - strandat 512.198 kb on + strandat 512.338 kb on + strandat 512.424 kb on + strandat 512.439 kb on - strandat 512.476 kb on + strandat 512.525 kb on + strandat 512.865 kb on + strand, within H281DRAFT_03434at 512.869 kb on + strand, within H281DRAFT_03434at 513.391 kb on - strand, within H281DRAFT_03434at 513.761 kb on - strand, within H281DRAFT_03434at 515.246 kb on - strand, within H281DRAFT_03435

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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511,443 - -0.3
511,669 + -0.8
511,688 + -0.6
511,688 + +2.7
511,689 - +0.4
511,822 - -0.2
512,198 + -0.4
512,338 + -0.2
512,424 + +0.7
512,439 - -0.6
512,476 + +0.0
512,525 + -0.2
512,865 + H281DRAFT_03434 0.23 -1.6
512,869 + H281DRAFT_03434 0.23 +0.1
513,391 - H281DRAFT_03434 0.46 -0.2
513,761 - H281DRAFT_03434 0.62 -1.1
515,246 - H281DRAFT_03435 0.50 +0.5

Or see this region's nucleotide sequence