Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02925 and H281DRAFT_02926 are separated by 142 nucleotides H281DRAFT_02926 and H281DRAFT_02927 are separated by 52 nucleotides
H281DRAFT_02925: H281DRAFT_02925 - ATP dependent helicase, Lhr family, at 530,937 to 535,571
_02925
H281DRAFT_02926: H281DRAFT_02926 - diguanylate cyclase/phosphodiesterase, at 535,714 to 537,780
_02926
H281DRAFT_02927: H281DRAFT_02927 - DSF synthase, at 537,833 to 538,720
_02927
Position (kb) 535
536
537
538 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 534.763 kb on - strand, within H281DRAFT_02925 at 534.940 kb on - strand, within H281DRAFT_02925 at 535.178 kb on - strand at 535.227 kb on + strand at 535.586 kb on - strand at 535.668 kb on - strand at 535.709 kb on + strand at 535.713 kb on + strand at 535.959 kb on + strand, within H281DRAFT_02926 at 535.960 kb on - strand, within H281DRAFT_02926 at 535.960 kb on - strand, within H281DRAFT_02926 at 536.154 kb on - strand, within H281DRAFT_02926 at 536.412 kb on - strand, within H281DRAFT_02926 at 536.422 kb on + strand, within H281DRAFT_02926 at 536.423 kb on - strand, within H281DRAFT_02926 at 536.608 kb on - strand, within H281DRAFT_02926 at 536.927 kb on - strand, within H281DRAFT_02926 at 537.304 kb on - strand, within H281DRAFT_02926 at 537.315 kb on - strand, within H281DRAFT_02926 at 537.455 kb on + strand, within H281DRAFT_02926 at 537.455 kb on + strand, within H281DRAFT_02926 at 537.456 kb on - strand, within H281DRAFT_02926 at 537.521 kb on + strand, within H281DRAFT_02926 at 537.522 kb on - strand, within H281DRAFT_02926 at 537.688 kb on + strand at 537.688 kb on + strand at 537.706 kb on + strand at 538.083 kb on + strand, within H281DRAFT_02927 at 538.084 kb on - strand, within H281DRAFT_02927 at 538.413 kb on + strand, within H281DRAFT_02927 at 538.414 kb on - strand, within H281DRAFT_02927 at 538.485 kb on + strand, within H281DRAFT_02927 at 538.486 kb on - strand, within H281DRAFT_02927 at 538.486 kb on - strand, within H281DRAFT_02927 at 538.486 kb on - strand, within H281DRAFT_02927 at 538.486 kb on - strand, within H281DRAFT_02927 at 538.486 kb on - strand, within H281DRAFT_02927 at 538.647 kb on + strand at 538.648 kb on - strand at 538.742 kb on - strand at 538.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 534,763 - H281DRAFT_02925 0.83 +0.7 534,940 - H281DRAFT_02925 0.86 +0.2 535,178 - +0.2 535,227 + +1.1 535,586 - +0.9 535,668 - -3.3 535,709 + +0.4 535,713 + -0.6 535,959 + H281DRAFT_02926 0.12 -5.0 535,960 - H281DRAFT_02926 0.12 -5.4 535,960 - H281DRAFT_02926 0.12 -4.1 536,154 - H281DRAFT_02926 0.21 -4.9 536,412 - H281DRAFT_02926 0.34 -3.8 536,422 + H281DRAFT_02926 0.34 -3.9 536,423 - H281DRAFT_02926 0.34 -3.0 536,608 - H281DRAFT_02926 0.43 -5.1 536,927 - H281DRAFT_02926 0.59 -3.4 537,304 - H281DRAFT_02926 0.77 -4.5 537,315 - H281DRAFT_02926 0.77 -4.2 537,455 + H281DRAFT_02926 0.84 -4.6 537,455 + H281DRAFT_02926 0.84 -4.6 537,456 - H281DRAFT_02926 0.84 -2.6 537,521 + H281DRAFT_02926 0.87 -2.8 537,522 - H281DRAFT_02926 0.87 -4.5 537,688 + -4.5 537,688 + +0.1 537,706 + -2.8 538,083 + H281DRAFT_02927 0.28 +0.3 538,084 - H281DRAFT_02927 0.28 +0.0 538,413 + H281DRAFT_02927 0.65 +0.8 538,414 - H281DRAFT_02927 0.65 +0.3 538,485 + H281DRAFT_02927 0.73 +0.5 538,486 - H281DRAFT_02927 0.74 +0.4 538,486 - H281DRAFT_02927 0.74 -0.2 538,486 - H281DRAFT_02927 0.74 +0.5 538,486 - H281DRAFT_02927 0.74 -0.1 538,486 - H281DRAFT_02927 0.74 -0.6 538,647 + +0.8 538,648 - +0.4 538,742 - -2.4 538,752 - -3.4
Or see this region's nucleotide sequence